Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2807 ATGGAGAGCTCATCAAAGGATCTAGAAGGGAAGTCAATTGGGAATAAGAGGTTGAAGGTTGCAGATGTTATTCCTCGATCATTTGAAAAGAAAAGTAACTCCAATGTGGCTTCCCATCAAGGAACCCCACAAAATACAGTTGCTGAAGGGGATTCAAACGTGACGCTGAATGCTGAAGCAAGTGAGGATAATGTGGCAGCCGATGGTTCCTTGTCGAAGAAGACAAAGAGTTTGCGGGATGTTGTGACTCCTCTATCTCATATGGCCTATGCTGATCAGCTGGAGCAGAAAAAGAACTCTCTCATGCAGATGCTCAAAAGACTTACTAGAAATGCTCGCAAAGCTTGTCCAAATGGTGTTTCTCTTCCTGAGTGGATTCTCAAGTCTAGGGAAATAGGTGGTCTTCCATGCAAACTGGAGGGTATTATTTCATCACCAATTGTTAATGGATATCGTAATAAGTGTGAATTTTCAGTTGGATATTCTCTGGAAGGCAAAGTTACAGTTGGCTTCATGCTTGGAAACTTCAGGGAGGGTGTAACAGCAGTTGAGGAAGCAGTGGACTGCCCAAATATTTCTACAATTGCTTGCAAATATGCTAGTATCTTTCAGGAATTTCTGCAGCATTCTGATTTACCAGTTTGGAACAGATTTAAAAATTCTGGATTTTGGCGTCAATTGACGGTTCGAGAGGGGAGGACAAATGGGAATGTCGTTAATGCTGAAACTTTTGGCAGTATTGCAGAGGTCATGCTTATTGTACAGGTTGCTACTGCTGGCTTTGATGACGCACAAGTATCTGCTGAATTTAAGAGGCTTGCTCAGGCATTTGTTGCCGGAGCTGCTTCACATTGTCCAGCATTGCCTTTGACAGCTCTGGTTGTACAGGATCACCAAGGAATATCCAATGTAGCACCAGCTGACGCACCACTGCGTTCACTTTACATTGCTAAAACAGAAGGTGATCCTGAGATGGATGAAAACAAAAATGCCATGGATGTAAGAATCCATGATTATATCAGCAATCTCCGGTTCTCTATATCTCCAACAGCATTCTTTCAGGTTAACACTCTTGCTGCTGAGCAGTTATACTCACTTGCCGGAGATTGGGCATGCTTAGGTCCTGGTACATTGCTTTTTGATATATGCTGTGGGACAGGAACAATTGGCCTGACGTTGGCACATCGAGTTGGTATGGTGATTGGAATTGAAATGAACGCTTCTGCAGTAGCTGATGCTCATAGGAATGCTGAGATTAATGGCATAAAAAATTGTCGATTTATATGTTCAAAGGCTGAGGACGTGATGGGATCTCTTCTAAAGGAATACCTAAATGTGCCTAAGGAACAAGTTGATGATCCTATTATCTCTGGAAGCAGCAATGATGTTTCCGAGGGTGGTGCCTGCCAAGAGCCTGAACGTGGTGAAATGGCATCTCATAGTTCAGAAAATAACAATGCTGAAGATGGAAGCGAGGTTCAGAATGGTAACAATTCTGAAAATGGGAATACTCCGGCACAACATTTTAAAAATGTTGTTGCTATTGTTGATCCTCCACGTGCTGGACTTCATCCAACGGTGATCAAAGCTTTGAGAAGTCATCCATGCCTCCGGAGGCTTGTTTACATTTCCTGTAATCCTGAAACTTTGGTGGCAAATGCTATTGAGCTTTGTACACCATCTCCCGCAAAAATTGAGAAAGGAAATAAAGACAACAGAGGGTGGAGAAACATGAGCAGTGCTGGTCTAGCAAGGCATAGGGCCAAGTCTATGCCCATCTCGGAGGCCTTTCAACCCATTAAAGCCATGGCTGTTGATCTGTTTCCACATACTCCCCATTGTGAATTGGTCATGCTTCTTGAGCGGTAG 1869 0.4334 MESSSKDLEGKSIGNKRLKVADVIPRSFEKKSNSNVASHQGTPQNTVAEGDSNVTLNAEASEDNVAADGSLSKKTKSLRDVVTPLSHMAYADQLEQKKNSLMQMLKRLTRNARKACPNGVSLPEWILKSREIGGLPCKLEGIISSPIVNGYRNKCEFSVGYSLEGKVTVGFMLGNFREGVTAVEEAVDCPNISTIACKYASIFQEFLQHSDLPVWNRFKNSGFWRQLTVREGRTNGNVVNAETFGSIAEVMLIVQVATAGFDDAQVSAEFKRLAQAFVAGAASHCPALPLTALVVQDHQGISNVAPADAPLRSLYIAKTEGDPEMDENKNAMDVRIHDYISNLRFSISPTAFFQVNTLAAEQLYSLAGDWACLGPGTLLFDICCGTGTIGLTLAHRVGMVIGIEMNASAVADAHRNAEINGIKNCRFICSKAEDVMGSLLKEYLNVPKEQVDDPIISGSSNDVSEGGACQEPERGEMASHSSENNNAEDGSEVQNGNNSENGNTPAQHFKNVVAIVDPPRAGLHPTVIKALRSHPCLRRLVYISCNPETLVANAIELCTPSPAKIEKGNKDNRGWRNMSSAGLARHRAKSMPISEAFQPIKAMAVDLFPHTPHCELVMLLER* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2807 622 PANTHER TRNA (URACIL-5-)-METHYLTRANSFERASE 4 622 IPR045850 -
Dod03g2807 622 ProSiteProfiles SAM-dependent methyltransferase RNA m(5)U-type domain profile. 81 622 IPR010280 GO:0006396|GO:0008173
Dod03g2807 622 MobiDBLite consensus disorder prediction 28 49 - -
Dod03g2807 622 Gene3D Vaccinia Virus protein VP39 316 621 IPR029063 -
Dod03g2807 622 MobiDBLite consensus disorder prediction 453 505 - -
Dod03g2807 622 CDD AdoMet_MTases 381 435 - -
Dod03g2807 622 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 84 622 IPR029063 -
Dod03g2807 622 ProSitePatterns RNA methyltransferase trmA family signature 1. 517 549 IPR030390 -
Dod03g2807 622 Coils Coil 91 111 - -
Dod03g2807 622 PANTHER TRNA (URACIL-5-)-METHYLTRANSFERASE HOMOLOG A 4 622 - -
Dod03g2807 622 MobiDBLite consensus disorder prediction 1 26 - -
Dod03g2807 622 Pfam tRNA (Uracil-5-)-methyltransferase 511 557 IPR010280 GO:0006396|GO:0008173
Dod03g2807 622 Pfam Methyltransferase domain 379 438 IPR025714 -
Dod03g2807 622 MobiDBLite consensus disorder prediction 1 49 - -
Dod03g2807 622 MobiDBLite consensus disorder prediction 479 505 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2807 K15332 - pvy:116105054 884.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2807 03 59907807 59916394 Dod03g2807 03 59907807 59916394 ECH