Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2793 ATGTACAAGAACCAGCTTCAGGAGCTGGCACAGCGAAGCTGCTTCAACCTCCCTTCGTACACGTGCATAAGGGAAGGTCCGGATCACGCGCCGCGGTTCAAGGCGACTGTGAACTTCAATGGAGAGGTGTTCGAGAGCCCTCACTACTGCTCCACCCTCCGCCAGGCCGAGCACTCCGCCGCAGAGGTCGCTCTCAACTCGCTCTCCCACCGTGGACCCTCTCACTCCCTCGCCGCAAGGATCCTCGATGAGACTGGAGTCTACAAGAACCTCTTACAGGAAATTGCACAAAGGGTAGGGGCTCCATTGCCACAGTACACAACATTCCGGTCAGGCCTAGGACACCTACCTGTTTTTACCGGGACTGTAGAATTGGCTGGAATTACATTTACTGGTGAACCTGCCAAGAACAAGAAACAAGCAGAGAAAAATGCAGCAATGGCAGCTTGGTCATCTCTAAAACAATTGGCAAAAGAAACTGCAAGCTCTTCAACTGAACCAGAGAACAATGACGAGCTCGAACAGATCACAATTGCTCGGGCCTTACTAAATTACCGTCTGAAGGAAAAGATGGCAATGTCAGGTCCAAATGCTGTGATTCAATTTCCAAAGAAGTTTCAGGTTCCGAATCCTAGGCCAACTAGTCCTCAACCACCACCCGCCACAACATCAAAGATACTTCCCTTAATTTGCCCAAGGACAACCCCTCGAAACAGGCCTTCATTGGCAACAGCAAATGAAAGTCCTCGAAGCAGGCATGCAGTAGCAACAACAGCTTCCAGTGGTAGTTCCATGGCGCCACCAGTATCTTCTACATCAGAAAGCCGAGGGAACTGTCGCCCAAGGTTCCCTGCAGCAGGAGCAGCACCTTATGTTCCCATTCGACAAATGAGATCACCTTGCCAAGGCATTGCGCCTCCTGTGACTATAAGGACTGCAGTACCTGTGTTCTCTGCACCACCTCTTCCGCCACCAGCAGCACTATCCCATCAAGTAATGCGGGCTCCTCCTGTATGTGTCGCTCCCCCGGTCACTATTCGGCAAGCTGTTCCGGTATTTGCTGCTCCACCGGTTCAGAAAGATGAACCTGTGCTGCCACTGCCGGATCCTAGTGCACCTACCCAGGAAGATAAATTGCCAGCTAAAACTCAGGAGACAGACACCAAAGCTGAGAACATTCCACCGGAATCCGAGACAGTGAAGAGCTTGGAGCAGTTGAACATTTGA 1227 0.5151 MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFESPHYCSTLRQAEHSAAEVALNSLSHRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFTGTVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETASSSTEPENNDELEQITIARALLNYRLKEKMAMSGPNAVIQFPKKFQVPNPRPTSPQPPPATTSKILPLICPRTTPRNRPSLATANESPRSRHAVATTASSGSSMAPPVSSTSESRGNCRPRFPAAGAAPYVPIRQMRSPCQGIAPPVTIRTAVPVFSAPPLPPPAALSHQVMRAPPVCVAPPVTIRQAVPVFAAPPVQKDEPVLPLPDPSAPTQEDKLPAKTQETDTKAENIPPESETVKSLEQLNI* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2793 408 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 1 70 IPR014720 -
Dod03g2793 408 MobiDBLite consensus disorder prediction 209 225 - -
Dod03g2793 408 Pfam Double-stranded RNA binding motif 88 153 IPR014720 -
Dod03g2793 408 Pfam Double-stranded RNA binding motif 2 68 IPR014720 -
Dod03g2793 408 Gene3D - 2 83 - -
Dod03g2793 408 PANTHER - 1 408 - -
Dod03g2793 408 SMART DRBM_3 88 154 IPR014720 -
Dod03g2793 408 SMART DRBM_3 2 69 IPR014720 -
Dod03g2793 408 MobiDBLite consensus disorder prediction 206 286 - -
Dod03g2793 408 SUPERFAMILY dsRNA-binding domain-like 2 68 - -
Dod03g2793 408 CDD DSRM_AtDRB-like_rpt2 86 154 IPR044451 GO:0003725
Dod03g2793 408 PANTHER DOUBLE-STRANDED RNA-BINDING PROTEIN 2 1 408 - -
Dod03g2793 408 Gene3D - 84 155 - -
Dod03g2793 408 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 87 155 IPR014720 -
Dod03g2793 408 CDD DSRM_AtDRB-like_rpt1 1 69 IPR044450 GO:0003725
Dod03g2793 408 MobiDBLite consensus disorder prediction 357 408 - -
Dod03g2793 408 MobiDBLite consensus disorder prediction 237 278 - -
Dod03g2793 408 SUPERFAMILY dsRNA-binding domain-like 88 159 - -
Dod03g2793 408 MobiDBLite consensus disorder prediction 380 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2793 Dod-Chr3 59807356 59811745 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2793 - - gmx:100815739 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2793 03 59807356 59811745 Dod03g2793 03 59807356 59811745 ECH
Dod10g1610 10 37061173 37061619 Dod03g2793 03 59807356 59811745 PCT