Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2790 ATGTTCTGGAAGCTCGCTTCTATCTCTGCCTCCTCTCCTGTGGAGGAAATATTAGACAAGGAGAACTTCACTCTTGACGACCTTCTGGATGAAGAAGAAATAATCCAAGAATGCAAGGCCTTAAACAGTCGTCTCATAAACTATCTGAGAGATAGAGCTCAGGTTGAACAATTGCTGCGCTACATTACCGAAGAACCACCAGAAGATGCTGAAAACAAACGGGTTTTCAAGTTTCCATTCATTGCCTGTGAGATCTTCACATGTGAAATTGATGTCATTTTGAAGACCTTGGTGGATGAAGAAGAGCTCATGGACTTATTATTCTCCTTCTTGGATCCTGATCGTCCTCATAGTGCCTTACTGGCTGGGTACTTTAGCAAGGTTGTTATTTGCCTAATGATTAGAAAGACAGTGCCACTTATGAATTATGTTAAAGCCCATCAGCATGTTTTTCGCCAACTGGTTGATTTGATAGGAATTACATCCATTATGGAGGTTTTGGTTCGATTAGTAGGCGCTGATGACCATGCATATCCCAATTTTATAGATGTGATGCAATGGTTAGCTGAGAGCAACCTGCTGGAGATGATTGTTGATAAATTAAGTCCAGCTAGTCCGCCTGAAGTGCATGCCAATGTGGCTGAAACATTATGTACAATAACTCGAATTGCATCATCTACTCTTGCAATTAAGCTTTCAAGTCCAAGTTTTGTCACCAAAATATTGGATTATGCATTGGAAGATTCACCATCAAAGTCTAGCCTTGTCTACTCACTTTCGGTGTGCATTTCTTTGTTGGATCCCAAAAGATCTGCTGTTTCATCTCCACTATTTCTTTCATTTCGAGGTCAAAACATGTACGAGCTGCCTCCAATGCCCGTAAACCCAGATACTATTGGTGCAATGCTCCCTAAACTTGATGAATTGCTTGTGCTTTTGAATGTGTCATCTGATGAAAAGGTATTGCCTACAACATATGGCGAAGTGAGACCTCCACTTGGGAAGCATCGATTAAAGATTGTGGAGTTTATTGCTGTACTTCTAAGAACTGGAAATGAAGTGGCAGAAAAAGAACTGGTCAACTCAGGAACCATTCGACGTGTTGTAGATCTTTTCTTTGAGTATCCATACAATAACTCATTACACCACCATGTAGAAAGTATCATATTATCATGTTTGGAGAGCAAAACTGATGCCGTTGTTGATCATCTTCTTCGAGAGTGTGATTTAGTTGCAAGGTTTCTAAAAGCAGATAAACATTGTATTCTTTCTGCTGAAAGTGATCTGCCAACAGTACCTGCTGCAGGAAAACAAGCACCCCGGTCCGGAAACATTGGACATATTACTAGAATTGTTAATAAACTTGTTCACTTGGCACATAACCGAAGCCATATATTGACATTTCTTCAGGAAAATAGTGAGTGGAATGAGTGGCAAACTACAGTTCTTCAGGATCGTAACATGGTTGAAAATGTTCACCGTTGGGCTTGTGGACGTCCAACTGCATTACAAGATAGGATGAGGGATAGTGATGATGATGATCTTCACGACAGAGACTATGATGTTGCAGCTTTAGCAAATAATTTGAGCCAGACTTTAAGATACAAAATCTATGGAAATGAGGATAATGAAGAGGAACGTGGCAGTATTGATCGGGATGATGAGGATGTCTACTTTGAGGATGACGCTGCTGAAGTAGTCATATCATCCCTAAGACTTGGTGATGATCAAGGGAGTAATTTGTTTACAAACTCCGACTGGTTTGCGTTCCAAGATGACAGAATCAGTGATGCACCTGGGGCCACATCATCCTCAGAGATGATGGATGAGATAAACTTGAATGGAACTGCTAATGGTGGCAGCAACAGTAGTGATGATGAGGTTGTGGTTGGAGAAGATGAAGAATTGGCAGACGGCAAAAATACTGTGAATGGTGCATCTAGCTCAAGCACCAACTTCTTTAGTGGATTAACTGGTAACAATTCTATGAATGGAGGTGCTTTAGACTTTGAAAGTGTGAAGGAAAGCGCTTCGCACGATATGGGATTTTTCCGGTTTGATGCACCTGAAAATGAGGACTTGTTTGAGGATAGGCCTTTACCTGATTGGGTGGCATGGGGGGAACCATCAAATGTGCAAGTTGCTGGCTCAAGCACAAATCCATTTTTGGATCATGATGAGTCTGATGGTTCTTCGTCTACTAAGCCTCAAGAAGTCTGCCCTAATCCGAGTTCTCCCTCAAATGGGGAATCGGTACCTTCAAATGGGGAATCGGTGCCTTCAAATGGGTCGCCAACTACTAGCGATTCAACTGAGGGGGTTCGTGACTTGAGTCAAAAATCGGTTGCAGTACCCTCTCTATTTGAAGAGGATGTTGAATTTGTTGGTGTAGAATTAGAAGGTACTGAGAAGGCAATGGAACAGGCTCTCAAAGAAGGGATAGTTGGGGAAGCTGGACCTTTGAAAAGAAACATTGCCAAAGTGCCAGAAAAAGAAATTTCTGAAGAGGGCAACCCTGGAATGAAGGAGTTCAATGATGCAAATTACTGGAGGGTTGACCAAGAAGTTGCTGTTCTGGAATGA 2583 0.4181 MFWKLASISASSPVEEILDKENFTLDDLLDEEEIIQECKALNSRLINYLRDRAQVEQLLRYITEEPPEDAENKRVFKFPFIACEIFTCEIDVILKTLVDEEELMDLLFSFLDPDRPHSALLAGYFSKVVICLMIRKTVPLMNYVKAHQHVFRQLVDLIGITSIMEVLVRLVGADDHAYPNFIDVMQWLAESNLLEMIVDKLSPASPPEVHANVAETLCTITRIASSTLAIKLSSPSFVTKILDYALEDSPSKSSLVYSLSVCISLLDPKRSAVSSPLFLSFRGQNMYELPPMPVNPDTIGAMLPKLDELLVLLNVSSDEKVLPTTYGEVRPPLGKHRLKIVEFIAVLLRTGNEVAEKELVNSGTIRRVVDLFFEYPYNNSLHHHVESIILSCLESKTDAVVDHLLRECDLVARFLKADKHCILSAESDLPTVPAAGKQAPRSGNIGHITRIVNKLVHLAHNRSHILTFLQENSEWNEWQTTVLQDRNMVENVHRWACGRPTALQDRMRDSDDDDLHDRDYDVAALANNLSQTLRYKIYGNEDNEEERGSIDRDDEDVYFEDDAAEVVISSLRLGDDQGSNLFTNSDWFAFQDDRISDAPGATSSSEMMDEINLNGTANGGSNSSDDEVVVGEDEELADGKNTVNGASSSSTNFFSGLTGNNSMNGGALDFESVKESASHDMGFFRFDAPENEDLFEDRPLPDWVAWGEPSNVQVAGSSTNPFLDHDESDGSSSTKPQEVCPNPSSPSNGESVPSNGESVPSNGSPTTSDSTEGVRDLSQKSVAVPSLFEEDVEFVGVELEGTEKAMEQALKEGIVGEAGPLKRNIAKVPEKEISEEGNPGMKEFNDANYWRVDQEVAVLE* 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2790 860 MobiDBLite consensus disorder prediction 711 779 - -
Dod03g2790 860 Pfam SIT4 phosphatase-associated protein 358 492 IPR007587 GO:0019903|GO:0043666
Dod03g2790 860 Pfam SIT4 phosphatase-associated protein 131 356 IPR007587 GO:0019903|GO:0043666
Dod03g2790 860 PANTHER SIT4 YEAST -ASSOCIATING PROTEIN-RELATED 1 858 IPR007587 GO:0019903|GO:0043666
Dod03g2790 860 MobiDBLite consensus disorder prediction 711 777 - -
Dod03g2790 860 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 6 REGULATORY SUBUNIT 2-LIKE ISOFORM X1 1 858 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2790 Dod-Chr3 59745691 59756225 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2790 K15501 - gmx:100805409 1390.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2790 03 59745691 59756225 Dod03g2790 03 59745691 59756225 ECH
Dod10g1608 10 37028181 37036868 Dod03g2790 03 59745691 59756225 PCT