Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2780 ATGGGTTTTGGACGAAATTCTTCCATGAGAAGTAGTGGAGATTACTTGGAAGGAATGATCCATGACTATGTTGGAGCGAAGGCCAAAGTGAAGGCTCCAAGAAGTGCTTCCACAAAATTTGTGGCAGCACTCACATGTCTCCAATTTTTCTTTGCAGTTTATGCAACATTCCTATTGTACTACATGGGACCTTCTATAGACCTAGGAACCAAGCCAGATTTCACGTGGGCCACAAGAATTGCACAACAATGGAAGCAGCACCTCATGATCACACCCCATGTTGTTGGTCACTACCAAGAAGCCTCTTCTCTCATAAGGGAAGAAATTCAGCCCATAAACCAATCCCAAGTGTGTGAGAGTGAGAAGATTGATTTCATGCAAAAGAAGTCCGATGATGTTCAAATGATCAAGTTGAAGAGGGAGCTCTACAATGAGATGTTGGAGTTCCAAAGCAAGACATTTGGAACTGAGACTCTTTTTCAGCTAATGGCAATGAAATCCGAATGGGACTTGAGAGGTCCAAACAAACCAAAGATCACAGTGTTATTGAACCATTTCAAGAGAAAGACACTTTGTGCTCAGCTTGATTCTTTGCTCCAACAGACCCTCCCATTCCACCATGTTTGGGTGCTCTCATTTGGGAGCCCCAATGAGCTCTCACTCAAGAGAATTGTGGAGAACTACAATGACACAAGAATCAGCTTCATAAGCTCAAGCTACGATTTCAAGTACTATGGAAGGTTCCAAATGGCTCTTCAAACTGAGGCTGATTTGGTTTACATTCTTGATGATGACATGATCCCTGGAAGGAAGATGTTGCAGATTTTGGCGCATGTGGCTGGGACAGAAAAATACAAGAACTCTGTGTTGGGGAGCATTGGGAGGATATTGCCTTTTAGGCAGAAGGATTTCACTTTTCCCAGTTACCGAAAGTTTAGGTCCAAGGAAGCAGGGTTGTATTTGCCTGATCCTGCTTATGATATCACTGTTGATAAGATTGTGCAGGTGGATTTCCTATCCAGCTCTTGGTTCTTGTCTGCTGAGCTTGTCAAGACCCTCTTCACTGAGACACCTTTTACCTTCTCAACTGGTGAAGATCTGCATCTAAGCTACCAGCTTCAGAAGTACAAAAATGCAGGGTCATTTGTTCTTCCAGTAGACCCTGTGGACAAGGAAACATGGGGTGACAGTGAACACAGGCTTGCATATGTATCAGAAACGACAGTGATCTTCAAGGACATAGTTCAAGTAAGAGATTATCAATGGTGGAAAGCACTTTCCACAGGTTATGTGACCCAATGGGCAGCAATGTACCCTCAAAAGATTGATGCACTCTTTTATGCTCACTCAGTTGATGAAGTCAAAGCACTTGCACCACTTCTTGAAAAGTTCAGGTCGACAGTTGGCAAAAAGGCCTATATTGTTGTCTCTGGGGGTAACTTCTGCCCTTGTGAAGATGCTGCAACAGCTTTGAAATGGCCTTTGTTGGTGTGCAAAGAGAGAAGGTTCAAGATCTTTGATTTGGCTATTGGATCACTTTCTGGGGTGTCAAACTCAGAGGTCCCAGTGATACAAGCAGTGTACTCCAGCATGAAGGGTTTAATCAAGATTCACAATCCTAGTGTGGTGATCACTGTGGCTGACATTGACCCTCATGTGATGAAGGCTCTTAAAATGGCATCAGAGACTAACTCAAATGGCACTACACTGGTGCTTTTGCCAAGGGCCTCAGTGTCAAAAGTTCTTTGGATGGCTGATCTGCGTTCAACAGCATTGCCAAATTGGAACCGGATGAGGATTTCTATTAACATCATCACCCAAAATAGAGCAAATTCTCTAGGAAGGCTTCTCAAGTCTCTGAGCAATGCTTACTATCTTGGAGATGAAGTCCCCATTACCTTCAACATGGACAGCAGGGTAGATGAGGCAACAATAAGACTAGTGGGCTCATTTGAGTGGCCTCATGGACCCAAAACCCTCAGAAGGAGGATCATCCAAGGTGGGCTCATCCGGGCCGTTAGTGAGAGCTGGTACCCTTCTTCTGATGATGACTTTGGGCTCCTACTTGAAGATGACATTGAAGTCTCACCTTACTATTACCTTTGGATCAAATATGCACTCATGGCTTACCACTATGACCCACAAGTCTCTCTCCCTGAACTCTCCTCAATCTCCCTCTACACCCCTAGGCTTGTTGAAGTTGTCAAAGAGAGGCCCAAATGGAATGCCACTGAATTCTTCAAACGCACTCACCCAAACACACCTTACCTTCACCAATTGCCATGCAGTTGGGGTGCAGTGTTCTTCCCTAAGCATTGGAGAGAGTTCTATGTGTACATGAACATGAGGTTCACTGAGGATGCAAAGGCAAACCCAGTTCAAATCCCAAAGTCTAGGACAAATGGTTGGCAAGCTTCATGGAAGAAGTTCTTAATAGACATGATGTACCTTAGAGGGTATGTTAGTCTTTACCCAAATTTCCCTAACCAAGCAAGCTTCTCAACAAACCATATGGAACCAGGGGCACACATTAGTGCAAAGGATAATGTTGTTAAGCACAACAAACATGACTTTGAGGTTCCACTCATGAAGGAAGATTTTAGGGACTTGTTGCCAGGTATGAAAATGCCACCAGCATCAAGGCTACCATCATTGAACCTCTTCAATCAGCCAGTTTCTCTAAAGGGTCTCAAGGCCGCAGGAGCTAAGTTGGGCCAAGATGTGCTAAGCTGTGACAATGCCACTGAGGTTGTAATGGTGGATCAACATACAGGTCTCCCACACCATTGCTCCAAATTCTGA 2802 0.4433 MGFGRNSSMRSSGDYLEGMIHDYVGAKAKVKAPRSASTKFVAALTCLQFFFAVYATFLLYYMGPSIDLGTKPDFTWATRIAQQWKQHLMITPHVVGHYQEASSLIREEIQPINQSQVCESEKIDFMQKKSDDVQMIKLKRELYNEMLEFQSKTFGTETLFQLMAMKSEWDLRGPNKPKITVLLNHFKRKTLCAQLDSLLQQTLPFHHVWVLSFGSPNELSLKRIVENYNDTRISFISSSYDFKYYGRFQMALQTEADLVYILDDDMIPGRKMLQILAHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVDKIVQVDFLSSSWFLSAELVKTLFTETPFTFSTGEDLHLSYQLQKYKNAGSFVLPVDPVDKETWGDSEHRLAYVSETTVIFKDIVQVRDYQWWKALSTGYVTQWAAMYPQKIDALFYAHSVDEVKALAPLLEKFRSTVGKKAYIVVSGGNFCPCEDAATALKWPLLVCKERRFKIFDLAIGSLSGVSNSEVPVIQAVYSSMKGLIKIHNPSVVITVADIDPHVMKALKMASETNSNGTTLVLLPRASVSKVLWMADLRSTALPNWNRMRISINIITQNRANSLGRLLKSLSNAYYLGDEVPITFNMDSRVDEATIRLVGSFEWPHGPKTLRRRIIQGGLIRAVSESWYPSSDDDFGLLLEDDIEVSPYYYLWIKYALMAYHYDPQVSLPELSSISLYTPRLVEVVKERPKWNATEFFKRTHPNTPYLHQLPCSWGAVFFPKHWREFYVYMNMRFTEDAKANPVQIPKSRTNGWQASWKKFLIDMMYLRGYVSLYPNFPNQASFSTNHMEPGAHISAKDNVVKHNKHDFEVPLMKEDFRDLLPGMKMPPASRLPSLNLFNQPVSLKGLKAAGAKLGQDVLSCDNATEVVMVDQHTGLPHHCSKF* 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2780 933 CDD Glyco_tranf_GTA_type 189 280 - -
Dod03g2780 933 SUPERFAMILY Nucleotide-diphospho-sugar transferases 174 377 IPR029044 -
Dod03g2780 933 PANTHER - 28 933 - -
Dod03g2780 933 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 599 848 IPR029044 -
Dod03g2780 933 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 166 386 IPR029044 -
Dod03g2780 933 PANTHER OSJNBA0004B13.7 PROTEIN 28 933 - -
Dod03g2780 933 SUPERFAMILY Nucleotide-diphospho-sugar transferases 597 789 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2780 Dod-Chr3 59609799 59614264 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2780 - - gsj:114374559 1707.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2780 03 59609799 59614264 Dod03g2780 03 59609799 59614264 ECH