Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2715 ATGGCACTGCCACACTCTTCATCCTCCGCCTTAGCGACAACACTCACGCTCTCCAAACCCCCAAATGCCCTTCCCATTTTCTCCTTCACAAATTTCCCATTTTTCACGCAACAAACAACACCAAATTCAATATCCAACAGACCCAGAAGCAGAAGCAGAAGGAGCCTCTTCCTAACCGTTGTCCCACGCGTTGCGGCGCCACCAACAACAACGGTTGAACCGAACCCAGAAACAGAGGAAGAAGCTTTTGATGAGAGCTCGTCGTCGAAATTCTCGTGGAGGGATCACTGGTACCCGGTTTCGTTGGTGGAAGATCTGAACCCTCGGTTTCCCACACCGTTTCAGCTTCTGGGCCGTGACATCGTCATTTGGTTCGATACTTCCAACTCCCAATGGGTTGCTTTCGACGATAAGTGCCCCCATCGCCTTGCCCCTTTATCTGAGGGAAGGATTGATGAAGGTGGGAATTTGCAGTGTTCGTATCATGGTTGGTCTTTTGACGGGTGTGGATCCTGTGTTAGGATCCCTCAGGCTTCCCCTGAAGGCCCAGAAGCACGTGCTCTAAAATCTCCTAAGGCGTGTGCCACTAGGTTCCCTACCATGGTGTCTCAGGGCTTGCTCTTTGTATGGCCTGATGAGAATGGTTGGGAGAAAGCCAATGCCTTCAAGCCTCCAATGCTGCCTGATGACTTCAACAAACCAGAGTTTGCCACAGTGAACATTCAGCGTGATCTTTTCTATGGCTATGATACTCTCATGGAGAATGTTTCTGACCCTTCTCACATTGATTTTGCTCATCACAAGGTTACAGGAAGGAGAGAGAAAGCCAAGCCTCTGCCATTCAAGATGGACTCTAATGGTCCATGGGGCTTTGCAGGAGCTAATGAAGGGAACCCACGAATCAGTTCTAAATTCGTTGCACCGTGTTATTATATGAACAAAATTGAGATTGATACCAAACTTCCACTTGTTGGTGACCAGAAATGGGTGATATGGATATGTTCCTTCAATGTCCCCATGGCACCTGGTAAAACTCGCTCCATTGTTTGCAGTGCTCGAAACTTTTTCCAGTTCACAGTGCCAGGGCCTGCCTGGTGGCAGGTGGTTCCTAGATGGTACGAACACTGGACTTCGAACAAGGTATATGACGGAGACATGATTGTCCTTCAAGGCCAAGAGAAAATTTTCCTTTCGGCAACCAAGGATGGCGGCGACATCAACAAACAGTACACAGACATCACATTCACGCCAACACAGGCGGATCGCTTTGTCTTGGCATTCCGGAATTGGCTTCGGCGGCACGGTGATGGCCAGCCAGAATGGTTCGGCACCAGCAACCAACAACCATTGCCATCAACAGTTCTATCTAAACGCGAGATGTTGGATAGATTTGAACAGCACACTTCGAAATGCTCATCATGTAAAGGAGCTTATGAGGCATTCCAAACATGGCAGAAAATCCTAATTGGTGCAACAGTTTTGTTCAGTGCAACATCAGGAATCCCAACAGAAACCCATCTGAGAATACTTTTGGCTGGACTTGCTGTTCTCAGCGCAGGATTAGCCTATGTCATAACCGAACTCCAAAAGAACTTTGTCTTTGTAGATTACGTTCATGCTGAAATCGATTAA 1632 0.4786 MALPHSSSSALATTLTLSKPPNALPIFSFTNFPFFTQQTTPNSISNRPRSRSRRSLFLTVVPRVAAPPTTTVEPNPETEEEAFDESSSSKFSWRDHWYPVSLVEDLNPRFPTPFQLLGRDIVIWFDTSNSQWVAFDDKCPHRLAPLSEGRIDEGGNLQCSYHGWSFDGCGSCVRIPQASPEGPEARALKSPKACATRFPTMVSQGLLFVWPDENGWEKANAFKPPMLPDDFNKPEFATVNIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRREKAKPLPFKMDSNGPWGFAGANEGNPRISSKFVAPCYYMNKIEIDTKLPLVGDQKWVIWICSFNVPMAPGKTRSIVCSARNFFQFTVPGPAWWQVVPRWYEHWTSNKVYDGDMIVLQGQEKIFLSATKDGGDINKQYTDITFTPTQADRFVLAFRNWLRRHGDGQPEWFGTSNQQPLPSTVLSKREMLDRFEQHTSKCSSCKGAYEAFQTWQKILIGATVLFSATSGIPTETHLRILLAGLAVLSAGLAYVITELQKNFVFVDYVHAEID* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2715 543 Gene3D - 92 235 IPR036922 GO:0051537
Dod03g2715 543 CDD Rieske_RO_Alpha_PaO 79 220 - -
Dod03g2715 543 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 41 543 - -
Dod03g2715 543 Pfam Pheophorbide a oxygenase 305 399 IPR013626 GO:0010277
Dod03g2715 543 Pfam Rieske [2Fe-2S] domain 96 180 IPR017941 GO:0051537
Dod03g2715 543 Gene3D - 236 438 - -
Dod03g2715 543 SUPERFAMILY Bet v1-like 204 439 - -
Dod03g2715 543 MobiDBLite consensus disorder prediction 67 86 - -
Dod03g2715 543 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 97 209 IPR017941 GO:0051537
Dod03g2715 543 SUPERFAMILY ISP domain 90 215 IPR036922 GO:0051537
Dod03g2715 543 PANTHER PHEOPHORBIDE A OXYGENASE, CHLOROPLASTIC 41 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2715 Dod-Chr3 58788898 58794058 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2715 K13071 - gmx:100812162 899.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2715 03 58788898 58794058 Dod03g2715 03 58788898 58794058 ECH