Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2706 ATGGCTAATCCCTGTGACCACGTCACCATTCTTCTATTCCTTGGTCTTTTGTTTCAAGGAGGATTGGTAGCATCAGCTTTGAGGAGCCAAGATGGGTCAGAGGAATGGGGTTATGTTGAAGTCAGACCCAAAGCCCACATGTTCTGGTGGCTATACAGAAGTCCCTATAGAGTGGAGGATTCCTCCAAGCCATGGCCAATCATTCTCTGGTTGCAGGGTGGACCTGGTGCTTCAGGAGTAGGGATTGGAAACTTTGAAGAGGTTGGGCCTTTGGACACGAATTTGAAGCCAAGGAACTCCACATGGTTGAGAAAAGGAGATCTCTTGTTTGTGGACAATCCAGTTGGAACAGGGTACAGCTTCGTGGAGGATAAGACACTCTTTGTGAGAACAGATGAGGATGCAGCCACTGACATGACTACATTGTTGATTCAAATATTCAACAGGAATGAGAGCCTCCAGAAGAGCCCCCTTTTCATTGTGGCAGAGTCTTATGGTGGCAAATTTGCTGTCACTCTTGGATTATCTGCTCTAAAAGCTATTGAAGACAAGAAATTGAAGCTTATTCTTGGAGGTGTGGCATTAGGTGACAGTTGGATCTCCCCAGAGGATTTTGTGTTCTCATGGGGTCCACTGCTTAAAGACCTTTCAAGGCTTGATGACAATGGATTAGCAAAATCAAACACTTTAGCTCAGCAGATCAAGCAGCAACTTGAGGAGGGTAAATTTGTTGATGCAACCAACTCATGGAGTAATCTTGAGAGCGTGATTAGTGCAAGCAGCAGCAATGTGGACTTTTACAACTTCCTTTTGGATGCTGGGAATGATCCAGTGAGCTTATTAGCAATAGAGCTGGGGTTATTCAAAGAATTAACCATGAAGCGGTACTCCAAATATCTTACCTCAACGAGGTTAAGTTCATCTCCTGGTGGTGATAATGATCTTGACACCTTATTAAACGGTGTCATAAAGAAGAAGTTAAAGATCATCCCTCAGAATCTCACGTGGGGAGAGCAGTCTGGTGATGTTTTCACATATCTTGAAGGTGATTTTATGAAGCCAAGAATTAATGAGGTTGACCAGCTTCTGGCCAAGGGGGTCAATGTGACTGTGTACAATGGACAACTTGACCTAATTTGTGCAACCAAGGGGACTGAAGCTTGGCTTAGGAAACTCAAGTGGGAAGGGCTTCAAAATTTCTTGGAGAAAGACAGAACACCCCTTTATTGTGGAAGTGACAAAACGACCAAAGGATTTGCCAAGTCATACAAAAACTTACACTTCTATTGGATCCTTGGAGCTGGCCATTTTGTACCAACGGATCAGCCATGTGTGGCACTAGACATGGTGGGTGCATTTACACAGTCACCGGCGGCTTGA 1380 0.4449 MANPCDHVTILLFLGLLFQGGLVASALRSQDGSEEWGYVEVRPKAHMFWWLYRSPYRVEDSSKPWPIILWLQGGPGASGVGIGNFEEVGPLDTNLKPRNSTWLRKGDLLFVDNPVGTGYSFVEDKTLFVRTDEDAATDMTTLLIQIFNRNESLQKSPLFIVAESYGGKFAVTLGLSALKAIEDKKLKLILGGVALGDSWISPEDFVFSWGPLLKDLSRLDDNGLAKSNTLAQQIKQQLEEGKFVDATNSWSNLESVISASSSNVDFYNFLLDAGNDPVSLLAIELGLFKELTMKRYSKYLTSTRLSSSPGGDNDLDTLLNGVIKKKLKIIPQNLTWGEQSGDVFTYLEGDFMKPRINEVDQLLAKGVNVTVYNGQLDLICATKGTEAWLRKLKWEGLQNFLEKDRTPLYCGSDKTTKGFAKSYKNLHFYWILGAGHFVPTDQPCVALDMVGAFTQSPAA* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2706 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 121 IPR001563 GO:0004185|GO:0006508
Dod03g2706 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 146 171 IPR001563 GO:0004185|GO:0006508
Dod03g2706 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 426 439 IPR001563 GO:0004185|GO:0006508
Dod03g2706 459 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 8 457 IPR001563 GO:0004185|GO:0006508
Dod03g2706 459 SUPERFAMILY alpha/beta-Hydrolases 33 456 IPR029058 -
Dod03g2706 459 PANTHER CARBOXYPEPTIDASE 8 457 - -
Dod03g2706 459 Pfam Serine carboxypeptidase 32 454 IPR001563 GO:0004185|GO:0006508
Dod03g2706 459 ProSitePatterns Serine carboxypeptidases, serine active site. 160 167 IPR018202 GO:0004185
Dod03g2706 459 Gene3D alpha/beta hydrolase 22 458 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2706 Dod-Chr3 58693543 58699246 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2706 K09646 - gmx:100808412 758.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2706 03 58693543 58699246 Dod03g2706 03 58693543 58699246 ECH