Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2705 ATGCAGCCGAATCTGTTCCCGTTCATATATAATAGCAGCAGCAGTAATAACACTGATGGCGATTTGAGCGAGGGGATCGAGAGCTCTAGGGTTTTGTTCTTGCTCCCTTTCTTGTTGCTCTCTCAAGGAGGAGCTATGGATCTCTCCAAGGTCGGGGAAAAGATCTTGAGCTCCGTTAGGTCCGCCAGGTCACTCGGCTTGATCCCTTCCCTTTCCGATCGCCCCGAGGTTCCAGCTCGAGCTGCTGCTGCAGCTGCTGTAGCTCGTGCTCTTGCAGGATTACCTCCTCACCAGAGGTATAGTCTTTCATCAAGTTCAGAAGAACTGAGTTCAATATATGGGAGCAGAAATCATGGCCAAGTAGTGGAGGAACTAGAGGATGAATTTTATGAGGAGGACTTTGACCCAATTAGGTACATTTTAGAGCACGTTCCAGCTGAAGATAATGAGCTAACATATTTTGAAAAACAGGCTGCCCTTAGATTAGCCCAACTGGATAGAGTAGCAGAGCATTTATCTCGGCATGTTATGCAGCATCACGAAGTAATGGTGAAGGGCATGGATTTGGTCAGAGAATTAGAAAAAGACTTGAGAATTGCAAATGTCATCTGTATGAATGGAAGAAGACACTTGACGTCATCTATGAATGAGGTTTCAAGGGATCTCATTGTGAATTCTTATTCAAAAAAGAAACAAGCTCTTCTGGACATGCTCCCAATCTTGACAGATCTTCAACGTGCATTGGACATGCAATCAACACTTGAAATTCTTGTGGAGGAAGGAAATTACTGCAAGGCATTTCAAGTCCTATCTGAATATTTGCAACTCTTGGATAGTCTGTCAGAACTTTCAGCAATACAAGAGATGAGCCGGGGTGTGGAGGCATGGCTGGGAAGAACTTTACAAAAGCTGGATGCTCTTTTATTGGGAGTATGTCAGGAATTCAAGGAAGATGGCTATATAACAGTAATTGATGCATATGCATTAATAGGGGATACAGCTGGTCTTGCTGAGAAGATACAGAGTTTCTTCATGCAAGAAGTTATATCAGAAACACACACTGTGTTGAAGGTTGTTGTGCAAGAGGTATGCCATCACTTTTCCAATTCCAGGCTCACTTACAGCGATCTATGCCTTCAAATACCCGATTCAAAGTTTAGGCAGTGCTTATTAAGAACATTGGCTGTTCTATTTGATGTTATGTGTTCATACCATGAAATTATGGATTTTCAGCTAGAAAGCAAGGAGTCAGCAGCACAAATTTCAAGTACGTGTAATGAAGAAAATTCCTGTAGTATGGGTGAGGCCCAGGAAGCTGATTCAGATGAAAGAGGCTGCAGCAATTCAAGGGAGGAATTTGCAACAATCAGCTCAGAGACGGAAACTACTGATTCACCATACACTGCTTCTCATGATCCCATTAAGGCTGGAAAGGAGGAGGATATTGTAGCATCAAGCATTGAATCCCCATGGTACCATCTTCGGAAAGATGCTACAGTATTTGTTTCACAAACCCTTCAAAGAGGGCGCAAGAATCTGTGGCATCTCACTTCAAGTCGTTTGTCAGTATTGCTTTCTTCTGCTGCAGCTTGTTCTGCAAGCATTCATCAGTTCTTGAAAAATTATGAAGATCTCAGCATTTTCATTTTGGCTGGGGAAGCCTTTTGTGGAATTGAAGCTGTTGAATTCAGGCAAAAGTTGAAGGTTGTTTGTGAAAACTATTTCATAGCTTTTCATCGACAAAATGTGCATGCGCTAAAAATGGTTTTGGAAAAAGAGACTTGGTTAAAATTACCTCCAGAGACAGTGCAAATTGTCAGTTTTGCTGGACTAATTGGTGATGGAGCACCATTGATATCTTTATCTGGTGCTAAATCACTTATTGCCAGTGCAATCCATTCCGACAAATCAATGAACCTGCTTCACACCAGTGCTAGAAGGAGTGGGTTCTCCCAATGGGTTAAAGGTGGAAACCCTTTTTTGCAGAAGTTATCAACCTCCAAAGAAGGTTATGGTCATAACCAACCTAATGGATCAATTTATGGTGAACAAGACGGAGGTTCAAATAAAGTCTCGCCTAGAAAGAATGATTCCAATCAAATGAATGGTGCCAATTCAATTTCAGAAGATGAAAATGAGGACCTTCTTGCAGACTTCATTGATGAAGACAGTCAGCTGCCAAGTCGTATTTCAAAACCCTTTCCAAGGGTTCACTCTTCACATGGTAATGATGAAGATAATACAACACAGACTGGATCTTCCCTATGCCTTTTAAGGTCTATGGATAAATACGCAAGGCTTATGCAGAAACTGGAAGTAGTAAATGTTGAATTCTTTAAGGGAGTGTGCCAATTGTTCGAAATTTTTTTCTATTTTATATATGAAACATTTGGTCAGCAAAACACTAGTTCAAGCGGAAAAGGCTCAACTAACTCTCTCAATTATCGGTTGAAGACAGCCTTATCCAGAATAAATCAAGACTGTGATGAGTGGATTAAGCCCCAGTCGTCATCACCATCATCTTTTGTACATTCGGAGTTGACGCCTACAAACCCTCCCAGCATGAGTTTTGGTCATTCCTCAGGGACTTCCTTGGGTCTCAAGGAAAGATGTGTAGCTGTTGACACTCTCTCTCTTGTTGCTCGAATACTGAATAGATCCAAAGCTCATCTCCAATCAATGCTATTGCAAAGTAATTCAACTGTACTTGAGGATTTCTATGTGCATCTGGTGGATGCTGTACCAGATCTTGTAGAGCATGTTAATCGGACAACAGTGAGATTACTGCTGAATGTTAATGGGTATATTGAACGCATTGCCAATTCGAAATGGGAAGTAAAAGAGCTTGGGATGGAGCATAATGGTTATGTTGATTTGTTGCTGGGAGAATTTAAGCACTATAAAACACGACTTGCTCATGGAGGAATTCGTAAAGAGATTCAAGACCTATTGTTGGACTATGGTCTCGAAATTGTGGCGGAAACTCTTGTTGAAGGACTTTCACGGGTGAAGAGATGTAGTGACGAGGGAAGAGCTTTAATGTCATTGGATCTGCAGGTTTTGATCAACGGGTTACAGCATTTTGCGTCGTTGAATGTGAAGTCCAAGCTACAAATGGTTGAAACTTTCATTAAGGCATACTACCTTCCCGAGACAGAATATGTACACTGGGCGCGTGCACACCCGGAATACAGTAAAAGCCAGATTGTTGGACTGGTCAACCTTGTTGCCACCATGAAAGGTTGGAAGAGGAAAACTAGGTTGGAAGTGCTGGAAAAGATTGAATGA 3288 0.4179 MQPNLFPFIYNSSSSNNTDGDLSEGIESSRVLFLLPFLLLSQGGAMDLSKVGEKILSSVRSARSLGLIPSLSDRPEVPARAAAAAAVARALAGLPPHQRYSLSSSSEELSSIYGSRNHGQVVEELEDEFYEEDFDPIRYILEHVPAEDNELTYFEKQAALRLAQLDRVAEHLSRHVMQHHEVMVKGMDLVRELEKDLRIANVICMNGRRHLTSSMNEVSRDLIVNSYSKKKQALLDMLPILTDLQRALDMQSTLEILVEEGNYCKAFQVLSEYLQLLDSLSELSAIQEMSRGVEAWLGRTLQKLDALLLGVCQEFKEDGYITVIDAYALIGDTAGLAEKIQSFFMQEVISETHTVLKVVVQEVCHHFSNSRLTYSDLCLQIPDSKFRQCLLRTLAVLFDVMCSYHEIMDFQLESKESAAQISSTCNEENSCSMGEAQEADSDERGCSNSREEFATISSETETTDSPYTASHDPIKAGKEEDIVASSIESPWYHLRKDATVFVSQTLQRGRKNLWHLTSSRLSVLLSSAAACSASIHQFLKNYEDLSIFILAGEAFCGIEAVEFRQKLKVVCENYFIAFHRQNVHALKMVLEKETWLKLPPETVQIVSFAGLIGDGAPLISLSGAKSLIASAIHSDKSMNLLHTSARRSGFSQWVKGGNPFLQKLSTSKEGYGHNQPNGSIYGEQDGGSNKVSPRKNDSNQMNGANSISEDENEDLLADFIDEDSQLPSRISKPFPRVHSSHGNDEDNTTQTGSSLCLLRSMDKYARLMQKLEVVNVEFFKGVCQLFEIFFYFIYETFGQQNTSSSGKGSTNSLNYRLKTALSRINQDCDEWIKPQSSSPSSFVHSELTPTNPPSMSFGHSSGTSLGLKERCVAVDTLSLVARILNRSKAHLQSMLLQSNSTVLEDFYVHLVDAVPDLVEHVNRTTVRLLLNVNGYIERIANSKWEVKELGMEHNGYVDLLLGEFKHYKTRLAHGGIRKEIQDLLLDYGLEIVAETLVEGLSRVKRCSDEGRALMSLDLQVLINGLQHFASLNVKSKLQMVETFIKAYYLPETEYVHWARAHPEYSKSQIVGLVNLVATMKGWKRKTRLEVLEKIE* 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2705 1095 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN-RELATED 16 1095 - -
Dod03g2705 1095 Pfam Protein of unknown function C-terminus (DUF2451) 865 1095 IPR019514 -
Dod03g2705 1095 MobiDBLite consensus disorder prediction 430 473 - -
Dod03g2705 1095 MobiDBLite consensus disorder prediction 664 708 - -
Dod03g2705 1095 Pfam Vacuolar-sorting protein 54, of GARP complex 122 410 IPR019515 -
Dod03g2705 1095 PANTHER UNCHARACTERIZED 16 1095 IPR040047 GO:0032456|GO:0042147|GO:1990745
Dod03g2705 1095 MobiDBLite consensus disorder prediction 726 752 - -
Dod03g2705 1095 MobiDBLite consensus disorder prediction 450 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2705 Dod-Chr3 58666005 58689773 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2705 K23288 - gmx:100788476 1736.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2705 03 58666005 58689773 Dod03g2705 03 58666005 58689773 ECH