Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2694 ATGGTTTTAGCTCCTCCTCTTCTTCTTCCTCAGCAGCTGCAATTCAGGCTGAGAGAACCATCAAAGAAGGCCCCAGAAATCGATTGGACACGAGACGAAGTCAAATCCGTCTACGACTCTCCCATTCTCGATCTCCTCTTCCATGGGGCTCAAGTTCACAGGCATGCTCATAACTTTAGGGAAGTGCAGCAGTGTACTCTTCTCTCTATTAAAACAGGAGGGTGCAGTGAAGATTGTTCCTATTGTCCTCAATCCTCTAGGTATGACACAGGACTCAAATCCCAAAGACTCATGAACAAGGAGGCTGTTCTTGAGGCTGCAAAGAAGGCAAAAGAGGCTGGAAGCACTCGCTTTTGTATGGGTGCTGCGTGGAGGGACACGATAGGAAGAAAGACCAACTTCAACCACATCCTTGACTATGTAAAAGAAATAAGGGGTATGGGGATGGAGGTGTGTTGCACCCTTGGTATGCTGGAGAAACAGCAGGCTCTTGAACTCAAGAAGGCAGGTCTCACAGCCTATAATCATAATCTTGATACTTCAAGGGAATACTATTCAAACATCATCACAACAAGGACATATGATGAGCGTCTAAAAACCCTTGAATTTGTTCGTGATGCAGGGATCAATGTTTGCTCTGGAGGAATTATCGGGCTTGGAGAAGCAGAGGAGGACCGTGTAGGGTTGTTGCATACGTTGTCAACACTCCCCACCCATCCAGAGAGTGTTCCTATTAATGCTCTTATTGCTGTAAAGGGAACCCCTCTTCAGGATCAGAAGCCTGTTGAAATATGGGAGATGATTCGTATGATAGCCACGGCGCGTATCATAATGCCGAAAGCAATGGTCAGGTTATCGGCTGGCCGAGTTCGGTTCTCCATGCCTGAGCAGACATTGTGCTTCCTTGCTGGTGCAAATTCCATCTTCACTGGCGAAAAGCTTCTGACTACGCCCAACAATGATTTTGATGCTGATCAACTTATGTTCAAAGTTCTTGGACTGCTCCCAAAAGCTCCAAGCTTGCATGCAGATGAAACTAGTGAGGCTGAGGATTACAAGGAGGCTGCTTCTTCTAGTTGA 1080 0.4657 MVLAPPLLLPQQLQFRLREPSKKAPEIDWTRDEVKSVYDSPILDLLFHGAQVHRHAHNFREVQQCTLLSIKTGGCSEDCSYCPQSSRYDTGLKSQRLMNKEAVLEAAKKAKEAGSTRFCMGAAWRDTIGRKTNFNHILDYVKEIRGMGMEVCCTLGMLEKQQALELKKAGLTAYNHNLDTSREYYSNIITTRTYDERLKTLEFVRDAGINVCSGGIIGLGEAEEDRVGLLHTLSTLPTHPESVPINALIAVKGTPLQDQKPVEIWEMIRMIATARIIMPKAMVRLSAGRVRFSMPEQTLCFLAGANSIFTGEKLLTTPNNDFDADQLMFKVLGLLPKAPSLHADETSEAEDYKEAASSS* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2694 359 Pfam Radical SAM superfamily 72 230 IPR007197 GO:0003824|GO:0051536
Dod03g2694 359 SFLD biotin synthase 22 341 IPR024177 -
Dod03g2694 359 SMART MiaB 65 273 IPR006638 GO:0003824|GO:0051536
Dod03g2694 359 PANTHER BIOTIN SYNTHASE 26 354 IPR002684 GO:0004076|GO:0009102
Dod03g2694 359 SMART BATS_2 244 336 IPR010722 -
Dod03g2694 359 PIRSF Biotin_synth 12 342 IPR024177 -
Dod03g2694 359 SFLD BATS domain containing 22 341 - -
Dod03g2694 359 ProSiteProfiles Radical SAM core domain profile. 60 289 IPR007197 GO:0003824|GO:0051536
Dod03g2694 359 CDD Radical_SAM 72 272 - -
Dod03g2694 359 TIGRFAM bioB: biotin synthase 37 334 IPR002684 GO:0004076|GO:0009102
Dod03g2694 359 SUPERFAMILY Radical SAM enzymes 27 336 - -
Dod03g2694 359 Pfam Biotin and Thiamin Synthesis associated domain 244 334 IPR010722 -
Dod03g2694 359 Hamap Biotin synthase [bioB]. 27 337 IPR002684 GO:0004076|GO:0009102
Dod03g2694 359 Gene3D Aldolase class I 26 338 IPR013785 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2694 K01012 - gmx:100808225 619.772