Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2684 ATGAGCAGCGGAGCAGGAAAGGTGGTGTGTGTGACGGGTGCTTCTGGTTTCATAGCTTCATGGATAGTCAAGTTCCTTCTTCAACGCGGTTACACTGTCAGGGCCACTCTTCGTGACCCAAGCAATCCCAAGAAGGTTGACCACTTACTTAAACTTGATGGTGCAAAAGAGAGGCTGCAACTGTTTAAGGCAGATCTTCTGGAAGAAGGTTCCTTTGACTCTGCTATTGAAGGCTGTGATGGTGTCTTTCATGCTGCTGCACCCGTTCTATTCAGCTTCAAAGACCCACAGGCTGAATTAATTGATCCAGCAGTGAAGGGAACACTTAATGTTCTTCAATCATGCGCAAAATCACCATCCGTGAAACGAGTCGTCTTAACATCTTCTATGGCTGCAGTTGCATCCAGTGGAAGGCCTAAAACTCCCGAAGTAGTAGTTGATGAGACGTGGTTTTCAGATCCTGTATTCTGTAGGGAATCAAAGAGGTGGTACACAGTTTCAAAGATTTTGGCCGAGGATGCTGCCTGGAAATTTGTGAATGAAAAAAACATTGACATGGTTTGTATTAACCCATCAATGGTGGCTGGACCTCTCTTACAACCAGAGGTTAACGGAAGTGTTGAGCAAATTTTAAACCTAATAAATGTAAATGGTAACTGCAGTGTACTTATCATCTTACTCAAAGTGACCTCATTAAACTCAAAAGAATCGGCCCTACAAATATTGAGTTCCATGCATAAGAATCATGGGTGTGAGGACGATAAGCCGTATTTGCCAACATATCAGGTTTCAAAAGAAAAGGCAAGGAGTTTGGGAGTTGAATTCATTCCCTTGGAAGTTGAATTGCTTGATCCAGCAGTGAAGGGAACTCTTAATGTTCTTCAATCATGTGCAAAATCACCATCTGTTAAACGAGTTGTTTTAACATCTTCTATTTCTGCAGTTGCATTCAGTGAGAGGCCTAAAACTCCAGACGTCGTGGTTGATGAGACATGGTTTTCAGATCCTGATTTCTGTTGGGAATCAAAGTTGTGGTACACACTTTCAAAGACTTTGGCTGAGGATGCTGCCTGGAAATTTGTGAATGAAAAAAGCATTGACATGGTTTCTGTTATCCCATCAATGGTTGCTGGACCTCTTTTACAACCAGAGGTTAATGAAAGTGTTCAGCCAATTCTAAACCTGATAAATGAATTTGTGTCTCTTGTTTTTCTGCTTTGGTGTGAAGATGATAAGCCGTATGTGCCAACATACCAGGTTTCCAAAGAAAAGGCAAAGAGTTTGGGAGTTGAATTCATTCCTTTGGAAGTAAGCATTAAAGAGACTGTAGAAAGTTTTAGAGAAAAGAAGATTGTCAACTTCTAA 1365 0.4139 MSSGAGKVVCVTGASGFIASWIVKFLLQRGYTVRATLRDPSNPKKVDHLLKLDGAKERLQLFKADLLEEGSFDSAIEGCDGVFHAAAPVLFSFKDPQAELIDPAVKGTLNVLQSCAKSPSVKRVVLTSSMAAVASSGRPKTPEVVVDETWFSDPVFCRESKRWYTVSKILAEDAAWKFVNEKNIDMVCINPSMVAGPLLQPEVNGSVEQILNLINVNGNCSVLIILLKVTSLNSKESALQILSSMHKNHGCEDDKPYLPTYQVSKEKARSLGVEFIPLEVELLDPAVKGTLNVLQSCAKSPSVKRVVLTSSISAVAFSERPKTPDVVVDETWFSDPDFCWESKLWYTLSKTLAEDAAWKFVNEKSIDMVSVIPSMVAGPLLQPEVNESVQPILNLINEFVSLVFLLWCEDDKPYVPTYQVSKEKAKSLGVEFIPLEVSIKETVESFREKKIVNF* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2684 454 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 280 398 - -
Dod03g2684 454 Gene3D - 402 454 - -
Dod03g2684 454 Gene3D - 7 280 - -
Dod03g2684 454 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 280 398 - -
Dod03g2684 454 Gene3D - 281 401 - -
Dod03g2684 454 Pfam NAD dependent epimerase/dehydratase family 284 384 IPR001509 -
Dod03g2684 454 Pfam NAD dependent epimerase/dehydratase family 9 210 IPR001509 -
Dod03g2684 454 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 409 452 - -
Dod03g2684 454 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 3 217 - -
Dod03g2684 454 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 270 IPR036291 -
Dod03g2684 454 CDD FR_SDR_e 9 273 - -
Dod03g2684 454 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 409 452 - -
Dod03g2684 454 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 217 - -
Dod03g2684 454 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 281 448 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2684 Dod-Chr3 58370282 58434990 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2684 279 454 Miscellaneous Gene Families AT5G19440 49.782 1.06e-67 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2684 - - gmx:100799213 380.563