Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2680 ATGTTGATCAAGGTGGCAGCTGAAGTTGAATTGAAAGCCATCATCTTCGTCGTTGTTGCTGTGTTGAGGCATGGCGTTGGATTTGGGGAGACCTTCTTGTCACTGTTCATGGTTGATGCATCCTACCTTTTTGTTTTGGTGGCTCGCATCCCACTTATTAAACGCGCCCGCGCGCTCCATAATGGTCAGGTATTTATGTTCCGCGCGCATTACAGGTTCTCGTGGGAGGCACGTGACCTTCAACGAGAGAAAACAAAGCCAAGTTTGGCTTCACCTTTTTCCCAACCGAATAAAAGTATATCACACTCTCTCTGCAACAACTACCACCAATCGAAGTACTTGCTTCAGCCTTTTGTTCTGTTTCACTCTCTTGACTCTCCAAAAGCCCTATTTCCTCTCTCTTGTTCCTTTGCTGTTACTGATTCCCCCTTTCTCTTCACCGTTTGTGTGATGACGACGTCGTTTGGTGGAGCTGCGACCTCGGCGGCGCTCAAGGACCCAAAGGTTCAGATTCCAAGCTTCCATGGCTTGAGGTCTGCTTCCGCTTCTGCTCTCTCTCGCAATGCTCTCTCGCTCCCTTCCTCCACGCGCTCTCTCTCCCTCATACGTGCCGTTTCCACGCCGGCAAAGCCTGAAACTGCCACTGTGAAGCGCAGCAAGGTTGAGATATTCAAAGAGCAGAGTAATTTCATAAGGTACCCTCTTAATGAGGAGGTGTTGACGGAGGCACCTAATATAAATGAAGCTGCCACACAGTTGATCAAGTTTCACGGTAGCTATCAGCAGTACAACAGGGAGGAGCGTGGTGGGAGATCCTACTCGTTTATGCTACGTACTAAGAACCCTTGCGGCAAAGTTTCGAACCGGCTTTACTTGACCATGGATGATCTTGCTGACCAGTTTGGAATTGGAACGCTTCGTTTGACCACCAGACAAACGTTTCAGCTCCATGGTGTTCTCAAGAAGGACCTTAAAACAGTAATGAGTACCATTATTCATAATATGGGCTCAACTCTCGGTGCTTGCGGTGATCTGAACAGAAACGTACTTGCCCCTGCTGCTCCGCTTGTGAGAAAAGACTACCTCTTTGCTCAACAAATTGCAGAAAATATTGCTGCACTCCTGACTCCTCAGTCTGGTTTCTACTATGATGTTTGGGTAGATGGGGAAAGGATTGTGTCGTCAGAACCTCCTGAAGTAGTTCAGGCACGAAATGACAATTCTCATGGCACAAACTTCCTGGATTCACCTGAGCCCATCTATGGAACTCAGTTCTTGCCAAGGAAATTCAAAATTGCTGTTACTGTGCCAACTGATAACTCGGTGGATATTCTAACAAATGACATTGGCATTGTTGTTGTTACTGATGAAGATGGGGAGCCCCAAGGGTTCAACATATATGTTGGTGGTGGAATGGGAAGAACACATAGGTTGGAAACCACTTTTCCCCGCCTGGCTGAACCACTGGGTTATGTACCTAAAGAGGATATTTTGTATGCAGTGAAAGCAATTGTTGTTACACAACGGGAAAATGGGAGAAGAGATGACCGCAAGTATAGTAGAATGAAATATTTGATCAGCTCTTGGGGCATTGAAAAGTTCAGAAGTGTAGTTGAGCAATATTATGGCAAGAAATTTGAACCTTTCCACAAATTGCCAGAGTGGGAATTTAAAAGTTATCTTGGGTGGCATGAGCAGGGTGATGGCAGTTTATTTTATGGGCTTCACGTTGACAATGGTCGCATTGGTGGAAAAATGAAAAAGACATTGAGGGAGGTTATTGAGAAATATAATTTGAATGTTCGGATCACTCCAAACCAGAACATCATCTTGACTGATATTCGTGCTGCATGGAAGCGTCCCATCACAACAACGCTTGCTCAAGCTGGTCTCCTGCAACCAAGATTTGTAGATCCCCTCAATTTAACAGCAATGGCCTGCCCTGCTTTCCCACTTTGTCCACTGGCAATTACTGAAGCTGAACGCGGGATACCAGATATTCTTAAGCGTATTCGTGCTATTTTTGAGAAGGTTGGTCTGAAGTATAACGAGTCTGTGGTTGTAAGGGTAACGGGCTGCCCTAATGGCTGTGCTAGGCCATACATGGCCGAACTTGGACTGGTTGGTGATGGTCCAAACAGCTATCAGATTTGGCTTGGAGGAAACAAGAATCAAACATCATTAGCTCGAAGTTTCATGGACAAGGTGAAGGTTCTAGACCTTGAAAAGGTTTTGGAGCCTTTGTTTTATTATTGGAAGCAAAAGCGCCAGTCTAAAGAATCATTCGGTGACTTCACTAACCGCATGGGATTTGAGAAGCTTAAAGAGTATGTTGAGAAATGGGAGGGTCCAGTAGCAGCACCAGCACGCTACAATCTCCGGCTCTTTGCTGACAAGGAGACCTACGAAGCAGTGGATGAGTTAGCAAAGCTTCAAAATAAGAGTGCTCATCAGTTGGCCATGGAAGTGATCCGCAATTTTGTTGCTTCCAACCAAAATGGAAAAGGCGAAATTCATTGA 2520 0.4563 MLIKVAAEVELKAIIFVVVAVLRHGVGFGETFLSLFMVDASYLFVLVARIPLIKRARALHNGQVFMFRAHYRFSWEARDLQREKTKPSLASPFSQPNKSISHSLCNNYHQSKYLLQPFVLFHSLDSPKALFPLSCSFAVTDSPFLFTVCVMTTSFGGAATSAALKDPKVQIPSFHGLRSASASALSRNALSLPSSTRSLSLIRAVSTPAKPETATVKRSKVEIFKEQSNFIRYPLNEEVLTEAPNINEAATQLIKFHGSYQQYNREERGGRSYSFMLRTKNPCGKVSNRLYLTMDDLADQFGIGTLRLTTRQTFQLHGVLKKDLKTVMSTIIHNMGSTLGACGDLNRNVLAPAAPLVRKDYLFAQQIAENIAALLTPQSGFYYDVWVDGERIVSSEPPEVVQARNDNSHGTNFLDSPEPIYGTQFLPRKFKIAVTVPTDNSVDILTNDIGIVVVTDEDGEPQGFNIYVGGGMGRTHRLETTFPRLAEPLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFHKLPEWEFKSYLGWHEQGDGSLFYGLHVDNGRIGGKMKKTLREVIEKYNLNVRITPNQNIILTDIRAAWKRPITTTLAQAGLLQPRFVDPLNLTAMACPAFPLCPLAITEAERGIPDILKRIRAIFEKVGLKYNESVVVRVTGCPNGCARPYMAELGLVGDGPNSYQIWLGGNKNQTSLARSFMDKVKVLDLEKVLEPLFYYWKQKRQSKESFGDFTNRMGFEKLKEYVEKWEGPVAAPARYNLRLFADKETYEAVDELAKLQNKSAHQLAMEVIRNFVASNQNGKGEIH* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2680 839 PANTHER BNAA01G31570D PROTEIN 151 783 - -
Dod03g2680 839 Pfam Nitrite and sulphite reductase 4Fe-4S domain 369 546 IPR006067 GO:0016491|GO:0020037|GO:0051536
Dod03g2680 839 Gene3D Sulfite Reductase Hemoprotein, domain 1 638 786 IPR045854 -
Dod03g2680 839 Gene3D Sulfite Reductase Hemoprotein;Domain 2 550 634 - -
Dod03g2680 839 SUPERFAMILY Nitrite and sulphite reductase 4Fe-4S domain-like 640 790 IPR045854 -
Dod03g2680 839 Gene3D Sulfite Reductase Hemoprotein, domain 1 342 549 IPR045854 -
Dod03g2680 839 Pfam Nitrite/Sulfite reductase ferredoxin-like half domain 271 330 IPR005117 GO:0016491
Dod03g2680 839 Pfam Nitrite/Sulfite reductase ferredoxin-like half domain 564 617 IPR005117 GO:0016491
Dod03g2680 839 SUPERFAMILY Nitrite and sulphite reductase 4Fe-4S domain-like 343 558 IPR045854 -
Dod03g2680 839 Pfam Nitrite and sulphite reductase 4Fe-4S domain 642 780 IPR006067 GO:0016491|GO:0020037|GO:0051536
Dod03g2680 839 ProSitePatterns Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 691 707 IPR006066 GO:0016491|GO:0020037|GO:0051536
Dod03g2680 839 SUPERFAMILY Nitrite/Sulfite reductase N-terminal domain-like 215 342 IPR036136 GO:0016491
Dod03g2680 839 PANTHER SULFITE REDUCTASE [NADPH] SUBUNIT BETA-RELATED 151 783 IPR045169 GO:0016491|GO:0020037|GO:0051536
Dod03g2680 839 SUPERFAMILY Nitrite/Sulfite reductase N-terminal domain-like 561 633 IPR036136 GO:0016491
Dod03g2680 839 TIGRFAM sir: sulfite reductase, ferredoxin dependent 209 781 IPR011787 GO:0020037|GO:0050311|GO:0051539
Dod03g2680 839 PRINTS Sirohaem Fe-binding site signature 691 709 IPR006066 GO:0016491|GO:0020037|GO:0051536
Dod03g2680 839 PRINTS Sirohaem Fe-binding site signature 642 660 IPR006066 GO:0016491|GO:0020037|GO:0051536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2680 K00392 - gmx:547693 1273.07