Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2666 ATGCAGAGGATAGGACAGGGTTTTGCTTCCGGATATGTGAATCTTGGTGAAATAGAAGTTCTCAAGGTTTCCAGGTTTGAGTTCATTTGTAGCAGCAATGCTATAAGGGACAAGAAAAAAGCTGTTGTGTTCTACAAGCCTGTTGGAATACCTGATAGTTTCCATATCCTTGGTCATTATTGTCAACCTAGCAACAAGCCTTTACGGGGTTTTGTACTTGTAGCTAGGGAAGTGGAAGCTTGCCTTCCTGAAACTACTTATGTTAACAACCACAATGAGCTCCCTCCTCTGAAGAATCCCCTTAATTTTAAGTTAGTTTGGAGTTCAAATGCAGGAAGTCAGGAAATGTCTAGTGGATGTGGTTACTTTTGGCTACCTGAGCCTCCAGAAGGATACAAGGCCCTTGGCTACTTGGTTACTAACAAACCTGACAAGCCTCAATTGGATGAAATGTGCTGTGTTCGCACTGACCTCACTGATAAATGTGAACCCTACCGCCTAATACTTGCTGTTAGTTCTAGAATTCCAGAGCTAGCATTTCAGTTGTGGAGCTTGAGACCTTGTGACCGTGGCATGCTGGGGAAAGGAGTTTCTGTTGGGACTTCTTTCTGCAGTAGTGGCTGGAAGATGGGAGAAGAGCTGCCGATCGCATGCTTGAAGAACCTAAATCCTGTTCTATCAGCAATGCCAAACCTGCAACAGCTAGATGCACTTATTAAGCATTATGGCCCTACTGTTTTCTTTCATCCGGATGAAGTTTACTTGCCATCTTCTGTGGATTGGTTTTTCAACAATGGAGCACTCTTGTACAGAAAGGGCATGTCTATGGGAGAGGGAATTGATGCAACTGGCTCAAATCTACCAGGTGGAGGATCAAATGATAAGGAGTCTTGGATAGACTTGCCAAGTGATGATAGAAGGGATTTGCTCAAACGTGGGAACTTGATAAGTGCCAGGCTTTATGTACATGTGAAGCCAGCTCTTGGTGGAACTTTTACAGACATTGCAATGTGGGTTTTCTGCCCCTTCAATGGGCCAGCAACTCTGAAAGTTGGAATAACTAATATACCTTTGAGCAAGATTGGAGAGCATGTTGGTGACTGGGAGCATTTTACACTTCGGATATGCAACTTCACTGGAAAGCTCTATAGTATATACTTCTCACAGCACAGTGGTGGTGAATGGGTGGATGCCTTCGACTTAGAATATATTGAAGGTAATAAAGCTATTGTTTACTCTTCAAAAAGTGGACATGCAAGTTACCCTCATCCTGGGACCTATATCCAAGGGTCTTCAAAACTTGGCCTTGGCATTAGGAATGATGCGAATCGCAGTAACTATTATGTGGATTCAAGTATTCACTTTGAGATTGTTGCAGCTGAATATCTTGGAGATGTTGTCAATGAGCCTCAATGGTTGCAGTTTATGAGAGAGTGGGGCCCCAAAATTGTTTATGATTCCAAAGCTGAGCTTGATAAGATAATCAATGCGCTTCCTCGGATGGTTCGATATTCAGTGAAGAACTTACTTAACAAGTTTCCAGTGGAGTTGTATGGTGAGGAAGGTCCTACAGGGCCAAAAGAGAAAAATAACTGGATAGGAGATGAAAGATGGTGA 1617 0.4292 MQRIGQGFASGYVNLGEIEVLKVSRFEFICSSNAIRDKKKAVVFYKPVGIPDSFHILGHYCQPSNKPLRGFVLVAREVEACLPETTYVNNHNELPPLKNPLNFKLVWSSNAGSQEMSSGCGYFWLPEPPEGYKALGYLVTNKPDKPQLDEMCCVRTDLTDKCEPYRLILAVSSRIPELAFQLWSLRPCDRGMLGKGVSVGTSFCSSGWKMGEELPIACLKNLNPVLSAMPNLQQLDALIKHYGPTVFFHPDEVYLPSSVDWFFNNGALLYRKGMSMGEGIDATGSNLPGGGSNDKESWIDLPSDDRRDLLKRGNLISARLYVHVKPALGGTFTDIAMWVFCPFNGPATLKVGITNIPLSKIGEHVGDWEHFTLRICNFTGKLYSIYFSQHSGGEWVDAFDLEYIEGNKAIVYSSKSGHASYPHPGTYIQGSSKLGLGIRNDANRSNYYVDSSIHFEIVAAEYLGDVVNEPQWLQFMREWGPKIVYDSKAELDKIINALPRMVRYSVKNLLNKFPVELYGEEGPTGPKEKNNWIGDERW* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2666 538 PANTHER PROCESSING PROTEIN PRP39, PUTATIVE-RELATED 5 538 - -
Dod03g2666 538 Pfam Vacuolar protein sorting-associated protein 62 5 536 IPR009291 -
Dod03g2666 538 PANTHER - 5 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2666 Dod-Chr3 58209543 58211999 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2666 - - gmx:100793026 887.1