Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2660 ATGTTACATTGTCAAAAACTTAACACCAAAGCTATATACTTTCTTCAGTTCTCAATTTTCACTGCTAATAACCGCAAAATAACTTCAAAGTTCAAAGTAATGGCTTCTGATCCTGAGCAACCCACTTTCTTCTCGCTCGCAAAGGAAGGAAAATCATCTGGTGAGATTGGGAGTGCAAGGGAGCCTCTGCTTATTGGGGCTCATGAATCTGAAAACTATTCTATCTCTGCTGCAATTCCCCCATTTCTCTTCCCAGCTCTTGGTGGGCTGCTATATGGCTATGACATAGGTGCCACATCTTGTGCAACAATCTCCATTGAGTCACCAGCACTAAGCGGAACATCATGGTACAACTTGTCCTCTGTTGAAATTGGTCTTGTAACTAGTGGATCATTATATGGTGCCTTGATTGGCTCTGTGTTGGCCTTTAATGTTGCTGACTTCTTAGGTAGAAGAAGGGAGCTGATTGCAGCTGCATTGCTGTATCTTGTTGGAGCCCTTGTAACTGCAGTAGCTCCAAATTTTGGTATATTGGTGGTTGGGAGATTTGTGTATGGTATAGGGATTGGACTGGCAATGCATGCTGCTCCAATGTACATTGCGGAGACAGCTCCATCATCCATACGTGGACTTCTAATTTCTCTGAAAGAGTTCTTTATAGTACTTGGGATGGTGGCAGGCTATGGAGTAGGTAGCCTTTTGGTAGACACTGTAGCTGGGTGGCGGTATATGTATGGAATTAGTAGTCCTTTGGCAATAATCATGGGCATTGGCATGTGGTGGCTCCCAGCTTCTCCTAGATGGCTACTTTTATGTGCTATACAGGGAAAAGGGGATAGCCAAAATTTGAAAGAAACAGCCATTCAATGTTTGTGCCACCTTCGGGGTCAAGCTATTGGTGACTCAGCTCCTCGGCAAGTAGATGAGATTCTGGCAGAGCTTGCTGGTGTAGGTGAAGAAAAAGAAGTTACATTTGGAGAAATGTTCAGAGGAAAATGCTTGAAAGCCCTTGTGATTGGTGCAGGATTGGTCTTGTTTCAACAGATCACAGGGCAACCAAGTGTGCTTTACTATGCAGGATCAATCCTTCAGAGCGCAGGATTCTCTGCAGCATCTGATGCAACCCGAGTCTCTATTCTCCTTGGCTGTTTTAAGTTGATTATGACTGGAGTTGCTGTCGGTGTCGTCGATAGGCTTGGAAGAAGACCTTTACTACTTGGGGGAGTTTCAGGGATGGCAATCTCTTTATTCCTTCTGGGTTCATATTACATTTTCTTGGATGATGCAGCGGCTGTTGCTGTAGTTGGTTTGCTGTTGTACGTGGGCTGTTATCAGATTTCTTTTGGTCCAATTGGATGGCTCATGATATCAGAGATTTTCCCCTTGCGCCTAAGAGGTCGAGGACTGAGCATAGCTGTACTTGTTAATTTTGGTGCAAATGCACTAGTCACATTTGCTTTTTCCCCATTAGAGGAATTGCTGGGAGCAGGAATTTTGTTCTACATATTTTGTGCAATAGCCTTGGCAGCCATTGTATTCATATACTTTGTTGTACCTGAAACCAAGGGGCTTACCCTAGAGGAGATCGAGGCCAAATGTCTTTAA 1605 0.4399 MLHCQKLNTKAIYFLQFSIFTANNRKITSKFKVMASDPEQPTFFSLAKEGKSSGEIGSAREPLLIGAHESENYSISAAIPPFLFPALGGLLYGYDIGATSCATISIESPALSGTSWYNLSSVEIGLVTSGSLYGALIGSVLAFNVADFLGRRRELIAAALLYLVGALVTAVAPNFGILVVGRFVYGIGIGLAMHAAPMYIAETAPSSIRGLLISLKEFFIVLGMVAGYGVGSLLVDTVAGWRYMYGISSPLAIIMGIGMWWLPASPRWLLLCAIQGKGDSQNLKETAIQCLCHLRGQAIGDSAPRQVDEILAELAGVGEEKEVTFGEMFRGKCLKALVIGAGLVLFQQITGQPSVLYYAGSILQSAGFSAASDATRVSILLGCFKLIMTGVAVGVVDRLGRRPLLLGGVSGMAISLFLLGSYYIFLDDAAAVAVVGLLLYVGCYQISFGPIGWLMISEIFPLRLRGRGLSIAVLVNFGANALVTFAFSPLEELLGAGILFYIFCAIALAAIVFIYFVVPETKGLTLEEIEAKCL* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2660 534 TIGRFAM SP: MFS transporter, sugar porter (SP) family 56 529 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod03g2660 534 Gene3D MFS general substrate transporter like domains 75 532 IPR036259 -
Dod03g2660 534 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 1 37 534 - -
Dod03g2660 534 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 2 37 534 - -
Dod03g2660 534 ProSitePatterns Sugar transport proteins signature 2. 184 209 IPR005829 GO:0016021|GO:0022857|GO:0055085
Dod03g2660 534 ProSiteProfiles Major facilitator superfamily (MFS) profile. 81 522 IPR020846 GO:0022857
Dod03g2660 534 ProSitePatterns Sugar transport proteins signature 1. 142 159 IPR005829 GO:0016021|GO:0022857|GO:0055085
Dod03g2660 534 CDD MFS_GLUT10_12_Class3_like 84 529 - -
Dod03g2660 534 Pfam Sugar (and other) transporter 84 531 IPR005828 GO:0016021|GO:0022857|GO:0055085
Dod03g2660 534 ProSitePatterns Sugar transport proteins signature 1. 392 408 IPR005829 GO:0016021|GO:0022857|GO:0055085
Dod03g2660 534 PRINTS Sugar transporter signature 434 455 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod03g2660 534 PRINTS Sugar transporter signature 89 99 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod03g2660 534 PRINTS Sugar transporter signature 457 469 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod03g2660 534 PRINTS Sugar transporter signature 179 198 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod03g2660 534 PRINTS Sugar transporter signature 347 357 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod03g2660 534 SUPERFAMILY MFS general substrate transporter 82 530 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2660 Dod-Chr3 58144172 58155245 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2660 34 534 Organic Solute Cotransporters AT5G17010 75.944 0.0 757
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2660 - - lja:Lj3g3v3639770.1 799.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2660 03 58144172 58155245 Dod03g2660 03 58144172 58155245 ECH