Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2643 ATGGCAACAAGAACAGTGAAAGTTAGCCACCTCTCTTTAGGTGCAAAAGAGCAAGATTTGCAGGAATTTCTGACATTTCCTGGAAAAATAGAATATATTGAAATGAAGAGTGAGAATGAAAGTTCCCAGGTTGCATATGTTACCTTCTGTAATTCAGAGGGAGCAGAAACTGCAGTTCTTCTATCGGGAGCAGTGTTGGCTGGACAGCCTATAACCATAGCTTTGGCTCCAGATTATGTTTTGCCCGCCTCTGCTGCATCCTCAATCTCAGCTGCAACAGATACCACAAACACAAATGCTGTGGCTCCTGAATCTGGTTTGAAAAAGGCTGAGGATGTTGTCACCACCATGCTAGCCAAGGGCTTCATTTTAGGCCAGGATGTGTTGAATCGTGCAAAAGCATTTGATGAGAAGCACCAGTTTACTTCTACTGCCACATCAAAAGTTGCTTCTTTAGACCAAAAGGTTGGTCTCAGTGACAAAATCAGTGCTAGCACGATTTTGGTTAGTGACAAAGTGAAAGAAATGGATGAGAAATTTCAAGTTTCTGGGAGGACTAAATCTGCATTCTCAGCAGCTGAACAGTCATTGAGCAGTGCTGGATCAACCTTCATGCAGAACCGCCACGTGTTAACGGCGGCCACGTGGGTCACTGGCACATACAACAAGGTTGCTAAGGCTGCTGAGGAGGTGGGACAAAAGACTATGGAGAAGGTTGTAGCACCAGAGAATCAAGACAAGACGAAAGAGAATGTCCACACCATTATGCCTGAACCTCCTCAACATGCTACCACAACTAATCAACCCTCTGAAGATGAATCACAACAGGCTACCAGTACCACAGCTGGTCAACCTTCCAGTCCAGCAACAACTCAGGGCTTGATCCTCTGA 891 0.4523 MATRTVKVSHLSLGAKEQDLQEFLTFPGKIEYIEMKSENESSQVAYVTFCNSEGAETAVLLSGAVLAGQPITIALAPDYVLPASAASSISAATDTTNTNAVAPESGLKKAEDVVTTMLAKGFILGQDVLNRAKAFDEKHQFTSTATSKVASLDQKVGLSDKISASTILVSDKVKEMDEKFQVSGRTKSAFSAAEQSLSSAGSTFMQNRHVLTAATWVTGTYNKVAKAAEEVGQKTMEKVVAPENQDKTKENVHTIMPEPPQHATTTNQPSEDESQQATSTTAGQPSSPATTQGLIL* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2643 296 Gene3D - 1 74 IPR012677 -
Dod03g2643 296 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 8 71 IPR000504 GO:0003723
Dod03g2643 296 MobiDBLite consensus disorder prediction 235 296 - -
Dod03g2643 296 PANTHER BINDING PARTNER OF ACD11 1 1 261 - -
Dod03g2643 296 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 4 78 IPR000504 GO:0003723
Dod03g2643 296 MobiDBLite consensus disorder prediction 258 296 - -
Dod03g2643 296 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 1 261 - -
Dod03g2643 296 SUPERFAMILY RNA-binding domain, RBD 3 77 IPR035979 GO:0003676
Dod03g2643 296 SMART rrm1_1 5 74 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2643 Dod-Chr3 57977114 57979457 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2643 - - gmx:100784398 358.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2643 03 57977114 57979457 Dod03g2643 03 57977114 57979457 ECH