Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2628 ATGAATTTGAATAACATGAAGGTTCCTAAGGTCCCTGGTGGGGGACTCTCTGCTTTGCTCAAAGTTAGCATATTAGGTGGGCTTGCTGTGTATGGTGCTGCCAACAGCTTGTACAATGTTGAGGGAGGTCATCGTGCCATTGTCTTCAATCGTGTTGTCGGCGTCAAGGATAAGTGGTTTGAGAGGCCTGTGATCTATGATGTTCGTGCACGGCCTCATTTGGTGGAGAGTACTTCAGGAAGCCGCGATCTCCAAATGGTGAAAATTGCTCTTAGAGTCCTTACCCGTCCTGTGCCAGACCAGTTACCAACAGTTTATCGAACCTTGGGTGAAAATTATAATGAAAGGGTCCTGCCTTCTATTATACATGAAACTCTGAAAGCTGTTGTCGCACAGTATAATGCCAGTCAGCTCATTACTCAGAGAGAGGCTGTTAGTCGAGAAATAAGGAAGATCTTGACTGAAAGGGCCTCCCATTTTAATATTGCATTGGATGATGTGTCAATCACTAGCTTGACGTTTGGTAAGGAATTTACAGCTGCAATTGAAAGCAAGCAGGTTGCTGCTCAAGAAGCTGAGAGGGCTAAGTTCGTAGTAGAAAAAGCTGAACAGGACAAAAGAAGTGCTGTTATTAGAGCACAGGGAGAAGCCAAGAGTGCCCAGTTGATTGGTCAAGCAATTACCAATAATCCTGCATTCATCACCCTAAGGAAAATTGAAGCTGCAAGGGAAATTGCTCAAACAATTTCAAATTCTGCCAACAAGGTTTACTTGAATTCAGATGACCTCTTGCTGAATCTTCAGGAGTTAAATTTGGAGCCCAGTGGGAAGAGATAG 837 0.4397 MNLNNMKVPKVPGGGLSALLKVSILGGLAVYGAANSLYNVEGGHRAIVFNRVVGVKDKWFERPVIYDVRARPHLVESTSGSRDLQMVKIALRVLTRPVPDQLPTVYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERASHFNIALDDVSITSLTFGKEFTAAIESKQVAAQEAERAKFVVEKAEQDKRSAVIRAQGEAKSAQLIGQAITNNPAFITLRKIEAAREIAQTISNSANKVYLNSDDLLLNLQELNLEPSGKR* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2628 278 PANTHER PROHIBITIN 1 275 IPR000163 GO:0016020
Dod03g2628 278 PRINTS Prohibitin signature 87 106 IPR000163 GO:0016020
Dod03g2628 278 PRINTS Prohibitin signature 204 220 IPR000163 GO:0016020
Dod03g2628 278 PRINTS Prohibitin signature 110 128 IPR000163 GO:0016020
Dod03g2628 278 PRINTS Prohibitin signature 133 149 IPR000163 GO:0016020
Dod03g2628 278 PRINTS Prohibitin signature 156 175 IPR000163 GO:0016020
Dod03g2628 278 PRINTS Prohibitin signature 181 204 IPR000163 GO:0016020
Dod03g2628 278 PRINTS Prohibitin signature 69 85 IPR000163 GO:0016020
Dod03g2628 278 CDD SPFH_prohibitin 37 220 IPR000163 GO:0016020
Dod03g2628 278 PANTHER PROHIBITIN-1, MITOCHONDRIAL-LIKE 1 275 - -
Dod03g2628 278 SUPERFAMILY Band 7/SPFH domain 60 193 IPR036013 -
Dod03g2628 278 Gene3D Band 7 domain 64 188 IPR036013 -
Dod03g2628 278 SMART PHB_4 36 186 IPR001107 -
Dod03g2628 278 Coils Coil 185 205 - -
Dod03g2628 278 Pfam SPFH domain / Band 7 family 42 203 IPR001107 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2628 Dod-Chr3 57839637 57841905 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2628 K17081 - gmx:100811958 486.878