Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dod03g2598 | ATGAGGGAAAGAAAGCCCAGTCCCTCTTCCGCCCCGCCGCTGCCTCCACCGCTTCCCGCTCCTTCAACAACAACGCCGCCATGCGCAACTACGACTGATTCTGCTGCCGCCGACGACCGCAGCCTTGACGTCGATCGCCGCTCCGATCGCACTCTTTACCGCGCTCCTCGCCGTGACGATTTCCTCTCAGATGTGTTCGATCCGTTTTCTCCAACTAGAAGCCTGAGCCAGGTTCTGAATATGATGGACCAGTTCATGGAGAATCCGTTCGTGTCAGCATCGCGAGGAATGGGAGGTGGAGCTCGACGAGGCTGGGACGCGAGGGAGACGGAGGACGCGCTGCTTCTGTGCGTGGACATGCCTGGCCTCGGCAAGGAGGATGTGAAGGTATCTGTGGAGCAGAACACTCTGACTATAAGAGGCGAAGGTGCGAAAGAAGGAGATGACGAACAGAGTGGGCGTAGGTACATTGGGAGGATTGACTTGCCTGAGAAGCTTTACAAGATTGATGAGATCAAAGCCGAGATGAAGAATGGTGTGCTCAAGGTCGTTGTGCCTAAGATGAAGGAAGAAGAGAGGAATGACGTGTTCAGTGTCAAGGTTGAGTAG | 609 | 0.5534 | MRERKPSPSSAPPLPPPLPAPSTTTPPCATTTDSAAADDRSLDVDRRSDRTLYRAPRRDDFLSDVFDPFSPTRSLSQVLNMMDQFMENPFVSASRGMGGGARRGWDARETEDALLLCVDMPGLGKEDVKVSVEQNTLTIRGEGAKEGDDEQSGRRYIGRIDLPEKLYKIDEIKAEMKNGVLKVVVPKMKEEERNDVFSVKVE* | 203 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dod03g2598 | 202 | CDD | ACD_sHsps-like | 106 | 187 | - | - | |
| Dod03g2598 | 202 | MobiDBLite | consensus disorder prediction | 8 | 24 | - | - | |
| Dod03g2598 | 202 | PANTHER | 23.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL | 25 | 202 | - | - | |
| Dod03g2598 | 202 | Gene3D | - | 61 | 201 | IPR008978 | - | |
| Dod03g2598 | 202 | PANTHER | 23.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL | 25 | 202 | IPR044656 | - | |
| Dod03g2598 | 202 | MobiDBLite | consensus disorder prediction | 1 | 50 | - | - | |
| Dod03g2598 | 202 | ProSiteProfiles | Small heat shock protein (sHSP) domain profile. | 96 | 202 | IPR002068 | - | |
| Dod03g2598 | 202 | SUPERFAMILY | HSP20-like chaperones | 71 | 193 | IPR008978 | - | |
| Dod03g2598 | 202 | Pfam | Hsp20/alpha crystallin family | 107 | 201 | IPR002068 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dod03g2598 | Dod-Chr3 | 57572932 | 57574216 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dod03g2598 | K13993 | - | gmx:547852 | 248.054 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Dod03g2598 | 03 | 57572932 | 57574216 | Dod03g2598 | 03 | 57572932 | 57574216 | ECH |