Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2581 ATGAATTCCCCTGTTCCAATAACCAAACACTCTAATCCCCTGAACACCTCTGTCTCAAAAACCAAACTTTCCATTGCAATGGATTCCCCTGTTTCATCAACAGACCCAATGTTTTCCCCTGTTTTCAAAACCAAGCTTTTCACTGCTCCAATTCCATTGGATTCCCATGTTTCACAAACCAAGCTTTCTCCTATTACTCCAATGGATTCCCATGTTTCAAAAACCAAGCTTCCCTCCCCAATGGATACCCCTGTTTCAACAGAGCAAAATTTTCCCCCTGTTTCGAAAACCAAGTTTTCTTCTGCTGCTCCAATGGATTCGCCTGTTTCAAAAACAAAACTCTCTGCTCCACCACCATTCTCTGCAGCTTCAAGTTCCATCAGCAGTGGCAGCAGCATCTGCAGCAGTAGCAGCAGCAGCGAAACCGACGAAAGCCCCATTTCCTCTCAACGTTTCGATCTCCACCATGTCAAATATCAGCTACCAATTGCATCATGCACAACACTTTCAGGATTCCAATCTCACAGATCACTGGCTATTCTTTCAGGCCACGTTGGCTCTGTTTCATGCTTGGCCCTGTGCGGTGAATTCATACTGAGTGCATCACAGGGCAAAGACATCATAGTTTGGCAGCAACCAGATTTGAGGCTCTTTGCGAAGTTCGGACAAGGCGATGGCTCTGTTAAGGCCCTTGCAACCGTTGGTAACAAGGTTTTCACTGCTCATCAAGATAGCAGGATAAGGGTCTGGAAGGTTTCGAGGAGCTCGGAGAATGTGTTCAAGCTTGTTGACGCACTTCCAACAACAAAGGACTATTTGGGGAAGTTCATGAAGCAGAGCAACTATGTCCAGACAAGGAGGCACCACAAGCGTTTGTGGATTGAGCATGCTGATAGCATCTCTTGTTTAACTGTTCATAATGGGTTGATCTATTCTGGTTCATGGGATAAGACCCTTAAGGTTTGGAGGCTCTCTGATTTGAAGTGTTTGGAGTCAATTAAGGCTCATGATGATGCCATTAATGGGTTGGTAGCATGTAAAGGGATTGTGTATTCTGCTTCTGCAGATGGGAAGATCAAGGCGTGGGAAAAGGAAGGGAAGGTTAAGAGTAAGAACAAGAACTCACAACAACATTGTTTGAAAGGGGTTTTGGAGGGTCACAAAGATGTTTCATTTAATTCTGTGGTTGTTTCTGATGATGGGAAATGGGTCTATGGTGGCGGTTCAGATGGGTTTGTTATGGGGTGGGAGGCCACATTGATATGTAAATCAGCATGTACTCATTATGCTTCCTATTATTTTGTCAGTGTAGACAAGAGACAAATGTCACTATATGAGTATCAGCATCTTAGAAGGATTGGAGCGAAATAA 1371 0.442 MNSPVPITKHSNPLNTSVSKTKLSIAMDSPVSSTDPMFSPVFKTKLFTAPIPLDSHVSQTKLSPITPMDSHVSKTKLPSPMDTPVSTEQNFPPVSKTKFSSAAPMDSPVSKTKLSAPPPFSAASSSISSGSSICSSSSSSETDESPISSQRFDLHHVKYQLPIASCTTLSGFQSHRSLAILSGHVGSVSCLALCGEFILSASQGKDIIVWQQPDLRLFAKFGQGDGSVKALATVGNKVFTAHQDSRIRVWKVSRSSENVFKLVDALPTTKDYLGKFMKQSNYVQTRRHHKRLWIEHADSISCLTVHNGLIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGLVACKGIVYSASADGKIKAWEKEGKVKSKNKNSQQHCLKGVLEGHKDVSFNSVVVSDDGKWVYGGGSDGFVMGWEATLICKSACTHYASYYFVSVDKRQMSLYEYQHLRRIGAK* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2581 456 MobiDBLite consensus disorder prediction 117 147 - -
Dod03g2581 456 SUPERFAMILY WD40 repeat-like 173 417 IPR036322 GO:0005515
Dod03g2581 456 MobiDBLite consensus disorder prediction 60 108 - -
Dod03g2581 456 Pfam WD domain, G-beta repeat 295 322 IPR001680 GO:0005515
Dod03g2581 456 Pfam WD domain, G-beta repeat 382 416 IPR001680 GO:0005515
Dod03g2581 456 ProSiteProfiles Trp-Asp (WD) repeats profile. 293 332 IPR001680 GO:0005515
Dod03g2581 456 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 111 421 IPR045182 -
Dod03g2581 456 Gene3D - 274 428 IPR015943 GO:0005515
Dod03g2581 456 PANTHER OS01G0946100 PROTEIN 111 421 - -
Dod03g2581 456 MobiDBLite consensus disorder prediction 60 147 - -
Dod03g2581 456 Gene3D - 129 273 IPR015943 GO:0005515
Dod03g2581 456 SMART WD40_4 326 363 IPR001680 GO:0005515
Dod03g2581 456 SMART WD40_4 214 251 IPR001680 GO:0005515
Dod03g2581 456 SMART WD40_4 286 323 IPR001680 GO:0005515
Dod03g2581 456 SMART WD40_4 377 417 IPR001680 GO:0005515
Dod03g2581 456 SMART WD40_4 174 211 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2581 Dod-Chr3 57478042 57480522 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2581 283 419 Miscellaneous Gene Families AT5G08390 21.387 3.97e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2581 - - lang:109353136 524.242