Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2578 ATGAGATACCCAACACTAAGCCCCTTTGGACAACACAACATTCTGTTCCTCAGAAGCTTCATGATCTTGCTCATTAGCTGCATAACCGTTAGGCTTAACTTGTGTCTTTCAAGTATCCCTTCGTCACTAAATGCACTTCCCCTAGTAGGCCAATTCAGTTTTGATGAAATTAGCCTAAGCCATGCAGCCAAAGACTTTGGCAACAGGTACCAATATCATCCAATGGCAGTTCTGAATCCGGAATCAGTTTCTGATATTGCTGCCACCATGAAGCATATATGGCTGATGGGTCCTAGCTCCCAGCTTACTGTTGCAGCAAGAGGCCATGGCCACTCACTCCAGGGCCAGGCACAAGCTCATGGAGGAGTTGTGATCAACATGGAATCGCTCAAGTTCCCAGGAATGCAGGTAAATAAAGGAGGAGGAGGAGATTCTCCATATGTGGATGCCTCAGGTGGAGAGTTGTGGATAAACATCCTGCATGAGACTCTAAGATATGGGTTGGCACCAAGATCATGGACAGATTACCTTCACCTCACAGTTGGTGGCACTCTCTCCAACGCTGGTGTCAGTGGCCAGGCATTTAGGCATGGTCCCCAGATAAGTAATGTTCAGCAGCTGGAGATTGTTACAGGAACAGGGCAGGTGGTAAACTGTTCCAAGGATCAGAATGAGGAACTGTTTCACAGCGTGCTAGGGGGGCTTGGCCAGTTTGGAATTATAACCCGGGCAAGAATTTTACTGGAACCAGCACCTGCTATGGTAAAATGGATTAGAGTGCTATATTCAGATTTCATAGCATTCACAAGAGACCAAGAGAGACTAGTATCTGGAGAAAACGCTTTTGATTATATTGAAGGATTTGTGATAATAAACAGAACTGGTCTATTAAATAATTGGAGATCATCCTTCAGCCCACAAGACCCCATTCAAGCTAGTCAGTTCAAGTCAGATGGAAAAACTCTCTTCTGCCTAGAATTGGCCAAATACTTCAATTCTGAAGAAATTGGTGTGGTAAATCAGGAAGTTGAGAAGCATTTGTCTTATTTGCACTATATCCCATCAACTCTTTTTCTAACAGAAGTCACATATGTAGATTTCTTAGACAGGGTGCATGTATCCGAGGTCAAACTGCGTTCAAAAGGCCTGTGGGATGTTCCACACCCATGGCTCAATCTTTTTATACCCAAGAGCAAAATACACAAGTTTGCAGAAGTAGTCTTTGGGAATATCCTAACAGAAACTAGCAATGGCCCCGTCCTTATCTACCCAGTAAACAAATCAAAGTGGGACAATAGAACTTCTGTTGTTATTCCAGATGGAGATGTTTTTTACTTAGTGGCGTTTCTTACCTCTGCAGTTCCGTCTTCTAATGGAACTGACGGCCTAGAACACATTCTAAATCAGAACAAAAGAATCTTAGAATACTGTGAAAGTGGCCATCTTGGAGTGAAGCAGTACTTGCCCCACTACAAGACACAGGAAGAATGGCAGGCCCACTTTGGTCCTAAGTGGGAGTCTTTTCTGCAAAGAAAATCTGTTTATGACCCATTGGCACTACTAGCTCCTGGCCAAAGAATAGTTCAAAAATCAATAACCTTCTCATGA 1608 0.4353 MRYPTLSPFGQHNILFLRSFMILLISCITVRLNLCLSSIPSSLNALPLVGQFSFDEISLSHAAKDFGNRYQYHPMAVLNPESVSDIAATMKHIWLMGPSSQLTVAARGHGHSLQGQAQAHGGVVINMESLKFPGMQVNKGGGGDSPYVDASGGELWINILHETLRYGLAPRSWTDYLHLTVGGTLSNAGVSGQAFRHGPQISNVQQLEIVTGTGQVVNCSKDQNEELFHSVLGGLGQFGIITRARILLEPAPAMVKWIRVLYSDFIAFTRDQERLVSGENAFDYIEGFVIINRTGLLNNWRSSFSPQDPIQASQFKSDGKTLFCLELAKYFNSEEIGVVNQEVEKHLSYLHYIPSTLFLTEVTYVDFLDRVHVSEVKLRSKGLWDVPHPWLNLFIPKSKIHKFAEVVFGNILTETSNGPVLIYPVNKSKWDNRTSVVIPDGDVFYLVAFLTSAVPSSNGTDGLEHILNQNKRILEYCESGHLGVKQYLPHYKTQEEWQAHFGPKWESFLQRKSVYDPLALLAPGQRIVQKSITFS* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2578 535 ProSiteProfiles PCMH-type FAD-binding domain profile. 70 251 IPR016166 GO:0071949
Dod03g2578 535 SUPERFAMILY FAD-binding/transporter-associated domain-like 52 250 IPR036318 GO:0050660
Dod03g2578 535 Pfam FAD binding domain 74 220 IPR006094 GO:0050660
Dod03g2578 535 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 74 109 IPR006093 GO:0016491
Dod03g2578 535 Gene3D - 127 253 IPR016169 -
Dod03g2578 535 Gene3D - 60 528 IPR016167 -
Dod03g2578 535 PANTHER CYTOKININ OXIDASE/DEHYDROGENASE-LIKE PROTEIN 10 532 - -
Dod03g2578 535 PANTHER GULONOLACTONE OXIDASE 10 532 - -
Dod03g2578 535 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 252 527 IPR015345 GO:0009690|GO:0019139|GO:0050660
Dod03g2578 535 SUPERFAMILY FAD-linked oxidases, C-terminal domain 252 527 IPR016164 GO:0003824|GO:0050660
Dod03g2578 535 Gene3D - 254 487 IPR016170 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2578 Dod-Chr3 57444742 57447915 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2578 K00279 - gmx:100808619 933.324