Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2571 ATGAACCAATCAGATTCAGATGTGAAAGACAATAGGAGGTCTGCAAATTACAAATCCAACATTTGGAAATACGGCTTCCTGCAGACACTTGCCAGTCAATATGACAAAGAAGAATTTGGCGTGCAGTTGGACAAGGGAGTGGCTGAAGTAAAGGGTCATTTTGTTCAAGAGATGAGCCTTTTGGAAAAATTAGAGTTGGTAGATTGGACCCAGAAACTAGGCCTTGCAACCCATTTTCATAAGGAAATTAATGAGTTACTCGAAACTATATTTGTCTCCGTCAAAAACATCAACAATCCAATTGTAGGAGAGAATGTGCATGCAACTGCACTATGCTTCAGGCTCCTAAGGCAACATGGATATCAAGTTTTTCCCGATACACTTGGCAACATCTTAGATGAAAAGGTTGTAGGAACGGGCAAAGGTTCATTTCTTGGTGATGCTATAGATCTTTTGGAGCTTCTTGAGGCCTCACACTTATGCTTAGAAGGAGAGAATATCTTGGATAAGGCCAAAACTTCTGCAATCAGTTCTATCAAGGATGCTTTCTTCCCTCCAAATTCCATCAATATCAACACACATCCAAACCTTGTATTTGAAAAAGTGCTCCATTCCATGGAGCTTCCTTCCCATTGGAGAGTAATGTGGTTTGATGTCAAATGGCATGTCAAGCAATATGAAAATGAGAAGCACATGGACCCCAATTTGCTTGAATTGGCTAAGCTAAATTTCAATATGGTTCAGGCCAAGCTTCAAAAGGAGGTCAAGGAATTATCCAGGTGGTGGGAGGATCTTGGCATAAAAAAGGCCTTGAGCTTTGCAAGAAATAGGATGGTTGAATGCTTCATGTGCGCCGCGGGAGTTGCTTTTGAGCCTAAGTTCAAATCCTTGAGGAAATGGCTCACTAAAGTAATTATTTTCGTACTAGTGATTGATGATGTTTATGATATTTACGCCTCATTTGAAGAATTGAAGTCGTTCACTATGGCATTTATTAGATGGGATGCCAAAGAACTTGAACACCTTCCACTGTTCATGAGGATTTGCTTTAATGCACTTAACGATGTCACAAATGAAACTGCTTATGAAATTGCCGGAGAAGAGAACTTTACTATGGTGTTACCTTACCTAAAGAAAGCGTGGATAGACTTTTGCAAAGCATTATACGTGGAAGCAAAGTGGTATAGAGAGAGATATGTTCCATCGTTGCAAGAATATATAAACAATGCTTGGATTTCATCTTCGGGGCCACTAATTCTACTCCATATATACTTTGCTACAATGCATGAAGTAACACAGGAGATAGACGATTTTTTATACAAACATGAAGATTTGGTCTATAATATATCTCTTGTAATTCGGCTGTGCAACGATTTAGGGACCACGGAGTTAATTTTTGCTTCATCATATTCTTTTGATTGA 1422 0.391 MNQSDSDVKDNRRSANYKSNIWKYGFLQTLASQYDKEEFGVQLDKGVAEVKGHFVQEMSLLEKLELVDWTQKLGLATHFHKEINELLETIFVSVKNINNPIVGENVHATALCFRLLRQHGYQVFPDTLGNILDEKVVGTGKGSFLGDAIDLLELLEASHLCLEGENILDKAKTSAISSIKDAFFPPNSININTHPNLVFEKVLHSMELPSHWRVMWFDVKWHVKQYENEKHMDPNLLELAKLNFNMVQAKLQKEVKELSRWWEDLGIKKALSFARNRMVECFMCAAGVAFEPKFKSLRKWLTKVIIFVLVIDDVYDIYASFEELKSFTMAFIRWDAKELEHLPLFMRICFNALNDVTNETAYEIAGEENFTMVLPYLKKAWIDFCKALYVEAKWYRERYVPSLQEYINNAWISSSGPLILLHIYFATMHEVTQEIDDFLYKHEDLVYNISLVIRLCNDLGTTELIFASSYSFD* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2571 473 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 19 231 IPR008930 -
Dod03g2571 473 Pfam Terpene synthase family, metal binding domain 237 463 IPR005630 GO:0000287|GO:0010333|GO:0016829
Dod03g2571 473 Gene3D - 58 232 IPR036965 GO:0010333|GO:0016829
Dod03g2571 473 SFLD Isoprenoid Synthase Type I 234 462 - -
Dod03g2571 473 SUPERFAMILY Terpenoid synthases 233 462 IPR008949 -
Dod03g2571 473 Gene3D Farnesyl Diphosphate Synthase 20 463 IPR008949 -
Dod03g2571 473 SFLD Terpene Cyclase Like 1 C Terminal Domain 234 462 IPR034741 -
Dod03g2571 473 PANTHER ALPHA-FARNESENE SYNTHASE 11 462 - -
Dod03g2571 473 PANTHER OS04G0344100 PROTEIN-RELATED 11 462 - -
Dod03g2571 473 Pfam Terpene synthase, N-terminal domain 22 181 IPR001906 GO:0010333|GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2571 Dod-Chr3 57281434 57285494 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2571 K14173 - gmx:100812119 656.366