Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2550 ATGGCCAAAGCAAGAAGCCTCGTCACAAGCAGTAGGACGTCTTTTTACATATCTAGTTTCGTGTACCATTCAAATTTCAAAGCTGCGGCTAGCGGTTTTGTGGAGGCCAAAGAAATTGGGGGAAATACATACATGGGAGCTCTCATTGCCACTGCTTCAGAGCTGGAAAAAGCCCATTACGGAATTATCCCAAAGGCATCAATCAGCAAAGAGAAAATGGCAAATGCTTTGAAGGGAGGAACTGTTATGCTGTCACTCTCTTCCTTGTGGACCACTACATCATCTTCCACTCAGCGCTCCCTTCTTTCCAATGCCACGCGCTTTCCTTCCAAGTTCCCTTTTTTCTCCATCTCTTCAACACCATCATCATCATTATCATCAGCAACGAGAAGGTGCTGCAGCAGAAACCCATCTGGGTTCCCTTCATTTTGCGCAGTCTCTTCTTCTGAGGCAGTGACGGAGCCCGCGGCAACTGTTGCCACCGGTAGTGGTGGTAACGGTGAAGCTGAGAACAAGGGTAGTGTTAAGGATGCGGCGGGGTTGCTTGACATAAGGGTTGGTCGCATTCTGAAGGCTTGGAAGCACGATGAGGCTGATTCTCTTTATGTGGAAGAGGTTGATATTGGTGAGCCTGAACCCAGAATCATATGCAGCGGCCTTGTCAACTATATCCCTCTCGAACACCTTCAGGGCAAAAAGGTCATTGTTCTTTCAAATCTGAAACCAAGAAATATGCGTGGTGTCAAGTCCTGTGGAATGCTTATGGCTGCTTCTGATGCAAAGCATGAGAGCGTTGAACTTCTGTTCCCTCTAGAGGAAGCAACCCCTGGCGAAAGAATATGGTTTGGATCTGAAGATGAAAAGGATAATCAACCTGCTGCTGCCACTCCCAATCAGGCAATATTACTTGTCTTATTGATATAA 924 0.4675 MAKARSLVTSSRTSFYISSFVYHSNFKAAASGFVEAKEIGGNTYMGALIATASELEKAHYGIIPKASISKEKMANALKGGTVMLSLSSLWTTTSSSTQRSLLSNATRFPSKFPFFSISSTPSSSLSSATRRCCSRNPSGFPSFCAVSSSEAVTEPAATVATGSGGNGEAENKGSVKDAAGLLDIRVGRILKAWKHDEADSLYVEEVDIGEPEPRIICSGLVNYIPLEHLQGKKVIVLSNLKPRNMRGVKSCGMLMAASDAKHESVELLFPLEEATPGERIWFGSEDEKDNQPAAATPNQAILLVLLI* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2550 307 Gene3D - 179 302 IPR012340 -
Dod03g2550 307 ProSiteProfiles tRNA-binding domain profile. 178 281 IPR002547 GO:0000049
Dod03g2550 307 CDD tRNA_bind_EMAP-II_like 181 281 - -
Dod03g2550 307 SUPERFAMILY Nucleic acid-binding proteins 178 292 IPR012340 -
Dod03g2550 307 PANTHER TRNA-AMINOACYLATION COFACTOR ARC1 FAMILY MEMBER 145 299 - -
Dod03g2550 307 Pfam Putative tRNA binding domain 184 278 IPR002547 GO:0000049
Dod03g2550 307 PANTHER TYROSINE--TRNA LIGASE, CYTOPLASMIC 145 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2550 Dod-Chr3 57030419 57034400 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2550 - - gmx:100499829 268.085