Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2534 ATGGCATTTCACGTAGCTTGCCCAATTACATGTCGCCGAATCTGCTACTGCGCCCTAGGGTTTCCGCGAGCGCTCCACGGTTCCGAAGCTGCAGATGGCTTCCTCGGCGATGTTGCGGCGCTCGGAGAATTCCTTGCCGACGCTCGCGGTGGCGCCGCCGCCACTGTCCAGGTCACGGTCCCTAAGGTCGTGCCGCCGCCTCCGCTGCCGCCTCCTGCTCCAGACGGAGTCCCTGCTGCCGGTGACGAGGAGTCAGCATCGATGAAGGCCAAGCGCGTAGCGCTGCAGAGGAAGGGCGCCGCCGCCATGATCGCCGCCGAGGAGTATGCCCGACGGTTTGAGTCCGTTGATGTGCCGGATACATCTGGAAATCTTAATGGTGAAGAGCAGGGTCAATCCAATGTCAAAGTCTTTTGTCGAATGTGCAATCGTGTTGAAAATGAAGGGAGTGAGAGAGCGAGGAAGATGCTATCATGTAAAAGTTGTGGCAAGAAGTATCATAGGAACTGCTTGAGAAGTTGGGCTCAAAATAGAGACTTATTTCATTGGAGTTCATGGACCTGTCGGGCTTGCCGAATTTGTGAGGCTTGCAGAAGGACTGGTGATCCAAGTAAGTTCATGTTTTGCAAAAGGTGCGATGGTGCTTACCATTGTTATTGTCTGCAACCTCCTCATAAGAATGTTAGTACTGGGCCCTATTTGTGCCCAAAACACACAAGGTGTCACAGTTGTGGATCCAATGTCCCTGGAAATGGACTAAGTGTGAGGTGGTTTCTGGGATACACCTGCTGTGATGCATGTGGAAGATTGTTTGTAAAAGGGAACTACTGTCCTGTTTGTTTGAAGGTTTACAGAGATTCAGAATCAACACCAATGGTTTGCTGTGATATTTGCCAGCGCTGGGTGCATTGCCACTGTGACAATATTAGCGATGAAAAATATCTCCAATTTCAAGTGGATGGGAATCTGCAGTATAGATGTCCCACTTGTCGCGGGGAATGTTATCAGATCAAGGGTCTTGAGGATGCAGTTCAAGAGCTCTGGAGGAGAAGGAATATCGCTGATAGAGATTTAATTGCCAGCTTGAGGGCTGCAGCTGGTTTACCAACTCAAGAAGAAATATTTTCTATTTCACCATTTTCAGACGATGAGGACAGTGGGCCTTTAAAATTAAAGAGTGAATCTGTCCGTTCCTTTAAATTCTCTCTGAAGAATTTGTCCAATAACTCACCAAAGAAGGTGAAGGATTATGGAAAGAAATCTTCAGGCAAAAAGTCTGCTAAGAAAAAAGAATCAGAGTCATTTATGACTGGGAAACATGAATTGCCCCATAGTTTTGAAGTACATAGTGATGTCAAATCTTTACATAGCTTGGATGATGATAGAAATGATGATGTACAATCCCAGAGGAATGAAGGTCCTGACGTTTATTCATCCCCTGCAGCTGGAAGCCTGAGTCAAACTGAAGTATCTTGCCCTGTCAATCAGCCAGGGGTTTTGAAACATAAGTTTGTTGATGAGGTGATGGTCAGCGATGAAGAGAGGAAGCCCCGAGTTGTTCGAATTAAAAGTAATAAGACGAATACTCTGGATAGTGAAGGGGAGAGTGGAAAGTGTAGTGATAAGACTCAGAATGTAAAAGGGAAGAAGTTGGTTATAAATTTGGGTGCACGGAAAATTAATGTGGCTAGTTCTCCCCGGTCTGATACTTCAAGTTGCCAAAGAGATCAAGATCTGGTTACTGTTAATGGAAATGAAGATATAAGCCAGTTGAGGAAGGGAGATAAATTTGCATTAGATAGACACGATGGTGCAGCTAGGTGTATTGATGGTAAAGGGAACAGGGTTGATTCTAGCCAACCAAAACTTTTAAAGGTTTCAGCAAGAGAAGGAAATTTGATTAAACTAGGCAAATTTAAGCCAGAAGTTTCTGAATTCAGCCTGACATCTGATAGAGGCAATATGTCTGATGGATCTGAAGTTCCTTTAGAGCGAGCTGGCATGTTGCAGGGAAAACGTAATACAGTGATTGATCAAGTTGGGACCGTTCAAGCTACATCAAGAGGTGAAAGGACATATTTGGGGAAGCAGTCGGAAGGCAGCTTTGATGCATATGATGAGAGAGATGACAATAATAAGCAGACACCTTCACATTCTTTGCGAAAAGATTCTAAACCGTTGCTGAGACTTAAATTCAGGAAACCTATCGTTGGAAGTCAAAATTCTACCCACCAAGAGGAGGAAAAGATTACAACCAAGGGCCAGAGGTCAAAAAGGAAGAGACCCTCACCTTTTAAGGAGAAAACATCTTTTAATGAGGCTAAAGATGTAAATCAATCACATCCAGGCAGTCTAATGGATGAGATCATGGATGCAAACTGGATATTGATGAAATTGGGTAATGATGCAATTGGAAAGAGAGTTGAAGTTCATCAGACATCCGACAATTCTTGGCACAAGGGAGTGGTTACTGACACAGTTGAAGGCACCTCAAAGTTACATGTTACCTTGGATGATGGGAAGGTGAAGACCTTGGAACTCAGGAAGCAGGGGGTCCGTTTTGTTCCACAAAAGCAGAAAAGATCAAAGACATGA 2595 0.4478 MAFHVACPITCRRICYCALGFPRALHGSEAADGFLGDVAALGEFLADARGGAAATVQVTVPKVVPPPPLPPPAPDGVPAAGDEESASMKAKRVALQRKGAAAMIAAEEYARRFESVDVPDTSGNLNGEEQGQSNVKVFCRMCNRVENEGSERARKMLSCKSCGKKYHRNCLRSWAQNRDLFHWSSWTCRACRICEACRRTGDPSKFMFCKRCDGAYHCYCLQPPHKNVSTGPYLCPKHTRCHSCGSNVPGNGLSVRWFLGYTCCDACGRLFVKGNYCPVCLKVYRDSESTPMVCCDICQRWVHCHCDNISDEKYLQFQVDGNLQYRCPTCRGECYQIKGLEDAVQELWRRRNIADRDLIASLRAAAGLPTQEEIFSISPFSDDEDSGPLKLKSESVRSFKFSLKNLSNNSPKKVKDYGKKSSGKKSAKKKESESFMTGKHELPHSFEVHSDVKSLHSLDDDRNDDVQSQRNEGPDVYSSPAAGSLSQTEVSCPVNQPGVLKHKFVDEVMVSDEERKPRVVRIKSNKTNTLDSEGESGKCSDKTQNVKGKKLVINLGARKINVASSPRSDTSSCQRDQDLVTVNGNEDISQLRKGDKFALDRHDGAARCIDGKGNRVDSSQPKLLKVSAREGNLIKLGKFKPEVSEFSLTSDRGNMSDGSEVPLERAGMLQGKRNTVIDQVGTVQATSRGERTYLGKQSEGSFDAYDERDDNNKQTPSHSLRKDSKPLLRLKFRKPIVGSQNSTHQEEEKITTKGQRSKRKRPSPFKEKTSFNEAKDVNQSHPGSLMDEIMDANWILMKLGNDAIGKRVEVHQTSDNSWHKGVVTDTVEGTSKLHVTLDDGKVKTLELRKQGVRFVPQKQKRSKT* 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2534 864 CDD PHD_SF 138 191 - -
Dod03g2534 864 PANTHER PHD FINGER FAMILY PROTEIN 2 858 - -
Dod03g2534 864 SUPERFAMILY FYVE/PHD zinc finger 128 194 IPR011011 -
Dod03g2534 864 MobiDBLite consensus disorder prediction 522 543 - -
Dod03g2534 864 MobiDBLite consensus disorder prediction 65 84 - -
Dod03g2534 864 SUPERFAMILY FYVE/PHD zinc finger 275 334 IPR011011 -
Dod03g2534 864 SUPERFAMILY FYVE/PHD zinc finger 183 244 IPR011011 -
Dod03g2534 864 MobiDBLite consensus disorder prediction 701 730 - -
Dod03g2534 864 MobiDBLite consensus disorder prediction 688 783 - -
Dod03g2534 864 PANTHER HISTONE ACETYLTRANSFERASE 2 858 - -
Dod03g2534 864 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 271 333 IPR013083 -
Dod03g2534 864 ProSiteProfiles Zinc finger PHD-type profile. 274 333 IPR019787 -
Dod03g2534 864 MobiDBLite consensus disorder prediction 413 469 - -
Dod03g2534 864 MobiDBLite consensus disorder prediction 470 492 - -
Dod03g2534 864 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 130 248 IPR013083 -
Dod03g2534 864 ProSiteProfiles Zinc finger PHD-type profile. 136 194 IPR019787 -
Dod03g2534 864 SMART PHD_3 276 331 IPR001965 -
Dod03g2534 864 SMART PHD_3 138 192 IPR001965 -
Dod03g2534 864 SMART PHD_3 193 239 IPR001965 -
Dod03g2534 864 MobiDBLite consensus disorder prediction 410 492 - -
Dod03g2534 864 ProSitePatterns Zinc finger PHD-type signature. 139 191 IPR019786 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2534 Dod-Chr3 56903767 56912165 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2534 - - gmx:100815407 1314.29