Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2501 ATGGTGATGGCCACAATGGCTAGAGCAGCTTCACTTAACTACGCAGAAGCATTGACGAAAAGCATTTTGTTCTTCGAAGGACAGAGGTCCGGGAAGTTGCCATCTTCCCAACGCATGACATGGCGGAAAGATTCTGCTCTTCATGATGGCTCCGATATTCATATGAATATGAAAGGTGGATACTATGATGCTGGCGACAATGTCAAATTCCATTTTCCTATGGCATTCACAACTACAATGCTTGCATGGAGTGTCGTGGAATTTGGAGATCTCATGGATTCATCAGATCTGCAACATGCATTGGAAGCAATTCGGTGGGGCACCGACTACTTCCTTAAAGCCACAAAGGTCCCTCGTATAGTTGTGGCACAAGTTGGCGAGCCAATTCATGATCACGACTGTTGGGAGAGGCCAGAAGACATGGACACGCCCAGGAACACATACTACGTCACTCGTGAGAAGCCAGGTTCAGAGGTGTCGGCTGAGATTGCAGCTGCACTTGCTGCATCTTCCATTGCATTTAGGAAAAGTGATTCCCGACGATACTCCATTGTGCTTCGCAATAGGGCTGCACAGGTGTTTAACTTCGCAAATAAATACCGGGGATCCTATAATGATAGCATAGGTGCTGTAGCGTGCCCCTTCTACTGCGATTTCAGCGGCTACATGGATGAGTTGATATGGGGAGCAGCATGGTTGTATAAGGCGACTAATGTATCTTACTATTGGAATTTTGTAAAAGAAAACATACAAGCCATAGAAGGCCCTATTTTAAGAAATGTAAATGGTCTTCCAGTTCCAGTTAATGGTGGAAGTTTTGCAGAATTTGGATGGGACTGCAAGCATGCTGGCATTAATGTACTTGTTTCACCGTGGGTGATGACCGATCCTTCCCTTGCGAGCCCTTTCATTCCCAATGCTGACAGATTTGTGTGTTCTTTGTTGCCCAATTCACCTACCAAATCAGTCTCATACTCTCAAGGTGGCCTTCTATTTAAACCTGGGGGAAGTAACCTACAGCACGCAACAGCCTTGTCTTTTCTTTTAGTAGCTTATGCTCGCCAGATGCGTGTTGCGCAGAAAGCAGTAAGCTGTGGAAATAATGTTGTTGCCGGACCGTCCACTCTCATAAATCTTGCAAAAAGCCAGGAAGCAATCCACTGGGGATGTCATTACATGGTGGGGTATGGACAAAAGTCTCCTCAGAAGATACACCATCGTGGTTCAACAAATCCATCTTTGGCTGTGCACCCAAAGCACATTGAGTGTGTGGAGGGATACCAATATTTCCATTTACCAACACCCAACCCCAACGTCCTAACAGGTGCTGTGGTTGGAGGCCCTGCTGAGGACGATTCATTCGAGGACTCGCGCTTGAATGTTGGCCAATCAGAGCCAACCACATACATGAACGCTCCTTTTGTTGGTGTTTTGGCTTATTTCAAGAAAGCAGCTAGTTATAATTTTACCCACCAACAACTATGA 1485 0.4593 MVMATMARAASLNYAEALTKSILFFEGQRSGKLPSSQRMTWRKDSALHDGSDIHMNMKGGYYDAGDNVKFHFPMAFTTTMLAWSVVEFGDLMDSSDLQHALEAIRWGTDYFLKATKVPRIVVAQVGEPIHDHDCWERPEDMDTPRNTYYVTREKPGSEVSAEIAAALAASSIAFRKSDSRRYSIVLRNRAAQVFNFANKYRGSYNDSIGAVACPFYCDFSGYMDELIWGAAWLYKATNVSYYWNFVKENIQAIEGPILRNVNGLPVPVNGGSFAEFGWDCKHAGINVLVSPWVMTDPSLASPFIPNADRFVCSLLPNSPTKSVSYSQGGLLFKPGGSNLQHATALSFLLVAYARQMRVAQKAVSCGNNVVAGPSTLINLAKSQEAIHWGCHYMVGYGQKSPQKIHHRGSTNPSLAVHPKHIECVEGYQYFHLPTPNPNVLTGAVVGGPAEDDSFEDSRLNVGQSEPTTYMNAPFVGVLAYFKKAASYNFTHQQL* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2501 494 Coils Coil 484 494 - -
Dod03g2501 494 Pfam Glycosyl hydrolase family 9 14 478 IPR001701 GO:0004553|GO:0005975
Dod03g2501 494 PANTHER ENDOGLUCANASE 2 485 - -
Dod03g2501 494 PANTHER ENDO-1,4-BETA-GLUCANASE 2 485 - -
Dod03g2501 494 SUPERFAMILY Six-hairpin glycosidases 13 485 IPR008928 GO:0005975
Dod03g2501 494 Gene3D - 9 492 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2501 Dod-Chr3 56522129 56526748 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2501 9 487 Glycoside Hydrolase AT1G70710 54.227 2.18e-180 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2501 K01179 - gmx:100814370 686.797