Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2482 ATGGAAGGATCAGCATCAACCCCTTCGTCCCAATCCCTCGCTTTCTACGACTTTCTCGATCGCATGCGAAACCCTGCTTCCCTCGATCTCCTCCGTTCCATTAAGAGCTTCATTGTATCATTTTCATTTTACCCATCCAATCCTGAAACTGATGGGAGGAGAGTGCAAGAATTCTTCTTGACAACAGAAACTGCAATCAGAGATCATCCACTGTGGGCGGGTGCCACTGAAGAAGAGATTGACTGTGCAATGGAGGGATTGGAGAAATACATAACGACTAAATTGTTCTCCCGGACATTCATTGCTTCACCTGAGGATTCAAAGATTGATAATGAAATATCAGAGAAAATATGCTTGTTGCAAACCTTTCTGAAGCCTGAACATTTGGACATACCAGCATTTCTTCGTAATGAAGCTTCATTGCTGCTTGCTGAGAAAGAATTGCAGAAAATCAATGCTTTCAAAGCTCCTCGTGAGAAACTCTCGAGTATAATGAATTGTTGTAGGGTCATCAACAATCTATTGCTTAATGGAGCACTTTCTGAAAATCATGAGCCAGCTGGAGCTGATGACTTTCTCCCGGTGCTCATATATGTTACAATAAAGGCAAGCCCCCTTGGCCAATCCCCCACAGTTGCATTCTAA 645 0.431 MEGSASTPSSQSLAFYDFLDRMRNPASLDLLRSIKSFIVSFSFYPSNPETDGRRVQEFFLTTETAIRDHPLWAGATEEEIDCAMEGLEKYITTKLFSRTFIASPEDSKIDNEISEKICLLQTFLKPEHLDIPAFLRNEASLLLAEKELQKINAFKAPREKLSSIMNCCRVINNLLLNGALSENHEPAGADDFLPVLIYVTIKASPLGQSPTVAF* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2482 214 Gene3D VPS9 domain 104 209 IPR037191 -
Dod03g2482 214 Gene3D - 22 101 - -
Dod03g2482 214 PANTHER RAB GDP/GTP EXCHANGE FACTOR 8 205 IPR045046 GO:0005085|GO:0016192
Dod03g2482 214 Pfam Vacuolar sorting protein 9 (VPS9) domain 144 205 IPR003123 -
Dod03g2482 214 ProSiteProfiles VPS9 domain profile. 107 214 IPR003123 -
Dod03g2482 214 SUPERFAMILY VPS9 domain 14 205 IPR037191 -
Dod03g2482 214 PANTHER OS03G0842700 PROTEIN 8 205 - -
Dod03g2482 214 Pfam Domain of unknown function (DUF5601) 32 96 IPR041545 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2482 Dod-Chr3 56371142 56374671 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2482 K20131 - egr:104450745 327.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2482 03 56371142 56374671 Dod03g2482 03 56371142 56374671 ECH