Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2478 ATGCGTGTTATGTTGATGACAATGAGCGAAGAAGTGAGTACGTGGAAATATCTAAGAACCGCAGGAGTGGTGCTTATGCTGCTGCTGCTGCTATGCTCTGATGGGGTGCCGCAAGTGAACTCACAGTCACAGAGAGTTCCTGCTTTGTTTGTCTTCGGAGATTCCTTGGTTGAAGTTGGCAACAATAACTTCCTAAGGTCCCTTGCAAGGGCTAATTACTTCCCTTACGGCATCGACTTCTCCAGAGGTGCCACTGGCCGATTCTCAAATGGCAAATCCCTCATTGACTTCATTGGAGACCTGTTGGGTGTTCCTTCTCCTCCAGCTTTTGCAAATCCCTCAACTGTTGGGCGTGTAATGCTTCATGGAGTCAATTTTGCATCAGCTAATGGTGGCATTCTGGACGAGTCAGGGCAGCACTATGGGGAAAGGTTTAGCATGAGCCGGCAAGTCCTGAACTTTGAGAGCACATTGAATCAGTACAGGACAATGATGGATGCAACCGCATTGCGTCAATATCTAGCCAAGTCCATAGCAGTTGTGGTTATCGGAAGCAATGACTACGTTAACAACTACCTCATGCCCACCTTATATGGATCCAGTTACAATTATACTGCCCCAGAGTTTGGCAATCTTCTTGTTAACAGCTACGTGCGACAAATTCTGGCACTGCATAGCTTAGGATTAAGGAAGTTCTTCTTAGCAGGAGTTGGACCACTTGGCTGCATCCCTAACCAAAGGGCCTCTGGTTTCGCCGCGCCAGGAAGGTGTGCGGACTTGGTTAATCAGATTGTTGGAACCTTCAATGAAGGGCTCAAATCAATGGTCGACCAGCTCAACAGAAACCATCCTGGTGCCATCTTTGTGTATGGTAACACTTATGGAGTCTTTGGTGACATCCTAAATAACCCTGCTGCCTACTCGTTTAGTGTTATTGATAGAGCTTGCTGTGGAATTGGAATGAACCAAGGCCAAATAACATGTCTTCCTTACCAAGTTCCATGTCAATATAGAAACCAGTATTTGTATTGGGATGCCTTCCATCCAACTCAGCCTGCAGTCTATGTCTATGCTTGGAGAGCTGTTAATGGCCCACCAAATGATTGCTATCCGATTAATGTGCAACAAATGTCTCTCCTTTAA 1143 0.4611 MRVMLMTMSEEVSTWKYLRTAGVVLMLLLLLCSDGVPQVNSQSQRVPALFVFGDSLVEVGNNNFLRSLARANYFPYGIDFSRGATGRFSNGKSLIDFIGDLLGVPSPPAFANPSTVGRVMLHGVNFASANGGILDESGQHYGERFSMSRQVLNFESTLNQYRTMMDATALRQYLAKSIAVVVIGSNDYVNNYLMPTLYGSSYNYTAPEFGNLLVNSYVRQILALHSLGLRKFFLAGVGPLGCIPNQRASGFAAPGRCADLVNQIVGTFNEGLKSMVDQLNRNHPGAIFVYGNTYGVFGDILNNPAAYSFSVIDRACCGIGMNQGQITCLPYQVPCQYRNQYLYWDAFHPTQPAVYVYAWRAVNGPPNDCYPINVQQMSLL* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2478 380 CDD SGNH_plant_lipase_like 47 355 IPR035669 -
Dod03g2478 380 Pfam GDSL-like Lipase/Acylhydrolase 49 351 IPR001087 GO:0016788
Dod03g2478 380 Gene3D SGNH hydrolase 36 364 IPR036514 -
Dod03g2478 380 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 34 378 - -
Dod03g2478 380 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 34 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2478 Dod-Chr3 56347199 56349774 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2478 37 377 Acyl Lipid Metabolism Gene Families AT4G10950 35.569 3.48e-67 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2478 - - gmx:100782184 581.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2478 03 56347199 56349774 Dod03g2478 03 56347199 56349774 ECH