Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2454 ATGATGAACAAGCTGGTGGTGGAAGTACTTGATGCGAGCGACCTCAAGCCAAAAGATGGAGAAGGGTCAGCTAGCCCTTTTGCGGAGATAGCCTTTGATGACCAACATCAGAGGACACAAACAAAGCACAAAGACCTCAACCCTTATTGGAACGAGAAGTTCGTGTTCAGCATCAAGGACCCAAGAGATCTCCCTCACAAGACAATCGAAGTTGCCGTATACAATGATCAAAAAGCTGGTCACCACAAGAACTTCCTTGGGAGGGTGAAGATCTCAGGCAACACTGTCCCTCTATCTGAGTCTGAGGCCACTGTCCAACGCTACCCACTTGACAAGCGCGGTCTTTTCTCAGACATCAAGGGAGAGATCGCTCTTAGAGTTTATGTCCTTCATGATCCTAATTTTTCTGCATATACCCCACAGCGACAACCACAACAACAACCACAAGAACAAGCAAGAGCTGGTCCTGGTGTTGTTGAACCTGAACATGAGCCGGATATTGAGGAGACTCCCTTGCAAGAAATAAACACCAACATGCTAGATGAGGAAGGCATGGTTGGTGGTGATGTTGAGAAGAAGAAGAATAATAAAAAGAAGAAAGAAAAGGAAGTGAGAACCTTTCATTCCATTGGAGCTGAGAAAGCCACTCCTGCTCCTGCTCCTGCTCCTGCAGCTGCAGCCAAGCCTTCTCAGCCGGGTCCTGCAGTGGGAATGACTATGAGGGCTGATTTTGCAAAAGCTGGGCCACCGAATGTGATGTTAATGCAGATCCCAAAGCAGAAACCGGAGTACTCATTGGTGGAGACGAGTCCTCCACTTGCTGCACGTTTGCGGTATAGAGGAAGTGACAAGATATCAACCACCTATGATCTTGTGGAGCAGATGTACTACTTGTATGTCAATGTGGTGAAGGCAAGGGATCTTCCTGTGATGGATATCACAGGAAGCCTTGACCCTTATGTTGAAGTCAAGGTTGGTAACTACAAAGGCATCACAAAGCATTTGGAGAAGAATCAGCACCCGGTTTGGAAGCAGATTTTTGCATTCTCAAGGGAGAGGTTGCAGTCAAATCTGCTGGAAGTTAATGTGAAGGATAAGGATATTGGGAAAGATGATTTTGTGGGTAGAGTCACTTTTGATATGAATGAAGTTCCTCTTAGGGTACCCCCAGGTAGCCCACTGGCTCCTCAGTGGTACTGGTTGGAGGACAAAAAAGGGCAGAAAGTGAACAATGGGGAAATCATGCTTGCTGTTTGGATGGGAACACAGGCTGATGAGTCCTTCCCAGAGGCTTGGCACTCTGATGCTCACAGAGTGAGTCACTCAAACCTTGCAAACACAAGGTCGCAGGTGTACTTCTCACCAAAGCTTTACTATCTTAGAGTTCAAGTTATTGAAGCACAAGATCTTGTGCCTTCTGATAAGGGCAGAGCCCCAGAGGCAGTTGTTGTGAGGGTGCAGCTCGGGCACCAGATCAGATTCACCAGGCCTTCTCCAGTGAGAGGGGTAAACCCAATTTGGACTGATGAGCACCTTATGTTTGTGGCTGCAGAGCCTTTTGAGGACTTCATAATTGTGACAGTTGAGGACAGAGTTGGTCCTACCAATGTTGAAATCTTGGGAAGGGAGATTATATCGGTGAGGAGTGTTCCGGCGAGGAATGAGACTAGCAAGCTCCCTGATCCTCGCTGGTACAACTTGCACAGGCCTTCTGCTGTTGGTGAGAAAGAGACTGAGAAGAAGAAGGAGAAATTCTCCAGCAAGATTCACCTCAGGATGTGCCTCGAGGCCGGGTATCATGTGCTTGATGAGTCCACACCTTTCAGCAGCGATCTCCAGCCATCCTCCAAACATCTGAGGAAGAAAAACATTGGAATTCTGGAACTTGGGATACTGAGTGCCCGGAATCTGCTACCTATGAAGGCCAGGGAGGGTGGGGCTACTGATGCATACTGTGTGGCAAAGTATGGCAATAAATGGGTCAGAACAAGAACTCTGCTTGACACACTGGCCCCTAGATGGAATGAGCAGTATACATGGGAAGTTTATGATCCATGTACTGTGATCACAGTAGGGGTTTTTGACAATTGGCACATCAACGGGAGTGGCGACGTAAGAGATCAGAGAATTGGGAAGGTGAGAATCCGGTTATCGACTCTGGAAACTGATAGAGTATACACTCATTATTATCCTCTGCTGGTTCTCCAACAGAATGGGTTGAAGAAGAATGGAGAGCTTCACTTGGCAGTGAGGTTCACTTGCACAGCATGGGTTAACATGGTAGCCCAGTATGGAAGGCCTTTGCTTCCCAAAATGCATTATGTCCAACCAATACCTGTTAGGCACATAGACTGGCTCCGCCACCAGGCCATGCAGATCGTGGCTGCTCGGCTATCCAGAGCCGAGCCGCCACTCAGAAGGGAAGCAGTTGAGTACATGCTAGATGTGGATTACCATATGTGGAGTCTCAGGAGAAGCAAGGCCAATTTTTACCGCATAATGTCACTCCTCTCAGGTGTTACTGCTGCGTGCAAATGGCTTGATGACATTTGCACCTGGAGAAACCCACTGACAACTTGCCTTGTTCACGTCCTGTTCTTGATTCTGGTTTGCTACCCAGAGTTGATCCTGCCAACCATTTTCCTGTACTTGTTTGTGAGGGGGATTTGGAATTACCGGTTCAGGCCAAGGTATCCACCCCACATGGATGCAAGGCTTTCACAAGCAGAAACTGCACACCCAGATGAACTGGATGAGGAGTTTGACACTTTCCCAACAACAAAACCTGCAGATATTGTGAGAATGAGGTATGATAGATTGCGGAGTGTCGCAGGGAAGGTGCAGACTGTGGTTGGAGATTTGGCTACTCAAGGAGAAAGAGCACAGGCCTTACTAAGTTGGAGAGACTCAAGGGCTACAGCTATCTTCATCATCTTCTCCCTCATTTGGGCGATCTTCATTTATGTAACTCCCTTCCAAGTGGTGGCAATTCTAGTAGGCCTCTACATGCTGCGCCATCCTCGGTTTAGGAGCAAGATGCCTTCGGTTCCTGTTAATTTCTTCAAGAGATTACCTTCTAAAGCAGATATGATGCTATGA 3099 0.4763 MMNKLVVEVLDASDLKPKDGEGSASPFAEIAFDDQHQRTQTKHKDLNPYWNEKFVFSIKDPRDLPHKTIEVAVYNDQKAGHHKNFLGRVKISGNTVPLSESEATVQRYPLDKRGLFSDIKGEIALRVYVLHDPNFSAYTPQRQPQQQPQEQARAGPGVVEPEHEPDIEETPLQEINTNMLDEEGMVGGDVEKKKNNKKKKEKEVRTFHSIGAEKATPAPAPAPAAAAKPSQPGPAVGMTMRADFAKAGPPNVMLMQIPKQKPEYSLVETSPPLAARLRYRGSDKISTTYDLVEQMYYLYVNVVKARDLPVMDITGSLDPYVEVKVGNYKGITKHLEKNQHPVWKQIFAFSRERLQSNLLEVNVKDKDIGKDDFVGRVTFDMNEVPLRVPPGSPLAPQWYWLEDKKGQKVNNGEIMLAVWMGTQADESFPEAWHSDAHRVSHSNLANTRSQVYFSPKLYYLRVQVIEAQDLVPSDKGRAPEAVVVRVQLGHQIRFTRPSPVRGVNPIWTDEHLMFVAAEPFEDFIIVTVEDRVGPTNVEILGREIISVRSVPARNETSKLPDPRWYNLHRPSAVGEKETEKKKEKFSSKIHLRMCLEAGYHVLDESTPFSSDLQPSSKHLRKKNIGILELGILSARNLLPMKAREGGATDAYCVAKYGNKWVRTRTLLDTLAPRWNEQYTWEVYDPCTVITVGVFDNWHINGSGDVRDQRIGKVRIRLSTLETDRVYTHYYPLLVLQQNGLKKNGELHLAVRFTCTAWVNMVAQYGRPLLPKMHYVQPIPVRHIDWLRHQAMQIVAARLSRAEPPLRREAVEYMLDVDYHMWSLRRSKANFYRIMSLLSGVTAACKWLDDICTWRNPLTTCLVHVLFLILVCYPELILPTIFLYLFVRGIWNYRFRPRYPPHMDARLSQAETAHPDELDEEFDTFPTTKPADIVRMRYDRLRSVAGKVQTVVGDLATQGERAQALLSWRDSRATAIFIIFSLIWAIFIYVTPFQVVAILVGLYMLRHPRFRSKMPSVPVNFFKRLPSKADMML* 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2454 1032 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 296 438 IPR035892 -
Dod03g2454 1032 PANTHER BNAA09G30540D PROTEIN 2 1032 - -
Dod03g2454 1032 ProSiteProfiles C2 domain profile. 608 730 IPR000008 -
Dod03g2454 1032 CDD C2D_MCTP_PRT_plant 626 749 - -
Dod03g2454 1032 Gene3D C2 domain 286 421 IPR035892 -
Dod03g2454 1032 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 149 IPR035892 -
Dod03g2454 1032 ProSiteProfiles C2 domain profile. 1 108 IPR000008 -
Dod03g2454 1032 Pfam C2 domain 459 567 IPR000008 -
Dod03g2454 1032 Pfam C2 domain 297 384 IPR000008 -
Dod03g2454 1032 Pfam C2 domain 625 732 IPR000008 -
Dod03g2454 1032 Pfam C2 domain 4 109 IPR000008 -
Dod03g2454 1032 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 625 758 IPR035892 -
Dod03g2454 1032 Gene3D C2 domain 2 162 IPR035892 -
Dod03g2454 1032 SMART C2_3c 4 110 IPR000008 -
Dod03g2454 1032 SMART C2_3c 626 729 IPR000008 -
Dod03g2454 1032 SMART C2_3c 459 559 IPR000008 -
Dod03g2454 1032 SMART C2_3c 297 393 IPR000008 -
Dod03g2454 1032 Pfam Plant phosphoribosyltransferase C-terminal 877 1032 IPR013583 -
Dod03g2454 1032 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 2 1032 - -
Dod03g2454 1032 MobiDBLite consensus disorder prediction 137 152 - -
Dod03g2454 1032 ProSiteProfiles C2 domain profile. 279 399 IPR000008 -
Dod03g2454 1032 MobiDBLite consensus disorder prediction 214 234 - -
Dod03g2454 1032 CDD C2B_MCTP_PRT_plant 297 422 - -
Dod03g2454 1032 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 458 616 IPR035892 -
Dod03g2454 1032 CDD C2A_MCTP_PRT_plant 4 130 - -
Dod03g2454 1032 ProSiteProfiles C2 domain profile. 438 565 IPR000008 -
Dod03g2454 1032 MobiDBLite consensus disorder prediction 137 165 - -
Dod03g2454 1032 MobiDBLite consensus disorder prediction 185 204 - -
Dod03g2454 1032 CDD C2C_MCTP_PRT_plant 459 614 - -
Dod03g2454 1032 Gene3D C2 domain 441 595 IPR035892 -
Dod03g2454 1032 Gene3D C2 domain 607 754 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2454 Dod-Chr3 56035520 56038618 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2454 2 1032 Lipid Metabolism Gene Families AT1G22610 71.048 0.0 1487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2454 - - gmx:100777852 1671.37