Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2449 ATGAGCGAGAGCAACAGCAACGGGGTAGGGAACAGCAGCATCAACAACGGCAACAACAGCAAGGATGAAGAAAAAGGAAGAGATCTGGGGCTGTACTTCCTGGATGTGTGCCGGCGCGGCGGAGGAGCAGGGGCAAAGGAGGCGGAGGCGGCGGACGAAGAGGCCGAGGAGGCACCCAGCGAGCTGAACACCATAAACAGCTCCGGTGGGTTCGTTGTTGTTTCGACGGACAAGCTGTCAGTGAGGTACACGAACGTGAACCTTCACGGCCACGACGTCGGCGTCATTCAGGCCAACAGGGCTGCTCCAACCAAGCGCCTCATCTACTACTTCGAGATTTATGTCAAGGACGCCGGCGCCAAGGGCCAGATTGCCATCGGCTTCACCTCCGAGTCCTTCAAGATGCGTCGCCAGCCTGGGTGGGAAGCCAACAGCTGTGGGTATCACGGGGATGATGGATTGCTTTACCGAGGACATGGCAAGGGGGAAGCCTTTGGCCCTACCTATACATCTGGGGACACTGTTGGTGCTGGAATTAACTATGCCGCCCAGGAATTCTTCTTCACTAAAAATGCGCAAGTTGTCGGGACAGTCTACAAGGACATGAAGGGTCCCCTTTTCCCAACCATTGCTGTTCATAGCCAAAATGAAGAGGTGCATGTCAACTTTGGGCAGAAACCATTCATTTTTGACCTAAAGGAATTTGAAGCACAAGAAAGAATGAAGCAGCATCTGAAAATAGAGGAAATACCTCTTCCGCCAAATGTCAGCTATGGAATTGTTCGTTCCTACCTGCTACACTATGGCTATGAAGATACATTGAATTCCTTTGACGTGGCTAGTAGAAGTACTGTTCCACCTATATATATAGCTCAAGAAAATGGAATTGATGAGCAGGAAATAACATATGCATTAAATCACAGAAAGACTCTTCGACAGCTAATTAGGGATGGGGAGATTGATGCTGCATTTGGTAAATTGCGTGAATGGTATCCCCAGATTGTTGAGGACAATACATCAGCTACGTGCTTTCTGCTTCACTGTCAAAAATTTATTGAATTAGTTCGGATTGGAGCACTGGAGGAGGCTGTCAAATATGGAAGAACAGAATTGTCATGTTTTTTTGGGTTGCCGGTCTTTGAGGAATTAGTTCAGGATTGTGTTGCTTTGCTGGCATATGAACGACCACTGGAATCCTCTGTAGGCTATCTCCTAAAAGACTCACAACGCGAAGTTGTAGCTGACACAGTAAATGCCTCGATCTTGTCCACAAATCCCAATATGAAAGAATCAAAAAATTGCTTGCACTCGTATCTTGAGAGGTTACTTAGACAGCTCACTGCCTGTTGCTTAGAGAAGCGATCTTTGAGTGGAGAGCAGGGGGAAGCTTTTCAACTTCATAGAGTGCTTAGCAGTGGTAAAAGAGGCTAG 1431 0.4787 MSESNSNGVGNSSINNGNNSKDEEKGRDLGLYFLDVCRRGGGAGAKEAEAADEEAEEAPSELNTINSSGGFVVVSTDKLSVRYTNVNLHGHDVGVIQANRAAPTKRLIYYFEIYVKDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGHGKGEAFGPTYTSGDTVGAGINYAAQEFFFTKNAQVVGTVYKDMKGPLFPTIAVHSQNEEVHVNFGQKPFIFDLKEFEAQERMKQHLKIEEIPLPPNVSYGIVRSYLLHYGYEDTLNSFDVASRSTVPPIYIAQENGIDEQEITYALNHRKTLRQLIRDGEIDAAFGKLREWYPQIVEDNTSATCFLLHCQKFIELVRIGALEEAVKYGRTELSCFFGLPVFEELVQDCVALLAYERPLESSVGYLLKDSQREVVADTVNASILSTNPNMKESKNCLHSYLERLLRQLTACCLEKRSLSGEQGEAFQLHRVLSSGKRG* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2449 476 Pfam CTLH/CRA C-terminal to LisH motif domain 306 449 IPR024964 -
Dod03g2449 476 SMART SPRY_3 106 227 IPR003877 GO:0005515
Dod03g2449 476 Gene3D - 44 244 IPR043136 -
Dod03g2449 476 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 304 362 IPR006595 -
Dod03g2449 476 PANTHER RAN BINDING PROTEIN 9-RELATED 47 474 - -
Dod03g2449 476 MobiDBLite consensus disorder prediction 1 24 - -
Dod03g2449 476 SUPERFAMILY Concanavalin A-like lectins/glucanases 66 230 IPR013320 -
Dod03g2449 476 MobiDBLite consensus disorder prediction 1 19 - -
Dod03g2449 476 Pfam SPRY domain 108 225 IPR003877 GO:0005515
Dod03g2449 476 ProSiteProfiles B30.2/SPRY domain profile. 40 228 IPR001870 -
Dod03g2449 476 SMART ctlh 304 362 IPR006595 -
Dod03g2449 476 PANTHER RAN-BINDING PROTEIN M HOMOLOG 47 474 - -
Dod03g2449 476 CDD SPRY_RanBP_like 94 224 IPR044736 -
Dod03g2449 476 SMART toby_final6 358 459 IPR013144 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2449 K23334 - gmx:100805319 802.742