Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2424 ATGGTTGAATCACAACCAAAGTTCTTCATCCCAGACTCAATCCAGGGTGTGAGTTATGACATTGCAGGGCAGATTAAGATGATATGGGATGTGATCAAAGCGCCATTGATAGTGCCTTTGCTCAACCTTAGTGTGTACATTTGCCTAGCAATGGCCCTCATGCTGTTCATTGAGAGGCTCTACATGGGTGTGGTCATCATCTTGGTCAAGCTCTTCTGGAAGAAACCTGAACAACGATACAAGTACGAGCCTATCCAAGACGATGTTGAACTTGGTAGCTCCAATTTCCCCGTCGTGCTCGTGCAGATTCCAATGTTCAATGAAAAAGAGGTTTACAAGGTGTCCATTGGAGCAGCTTGTAATCTTTCATGGCCAGCGGATCGTCTCGTGATCCAAGTACTCGATGATTCTACTGATCCTGTCATCAAGCAAATGGTGGAGATGGAATGCCAGAGATGGGCAAGCAAAGGTATCAACATAACGTACCAAATAAGAGAGAATAGAACGGGTTACAAAGCAGGTGCACTGAAAGAAGGGCTTAAGCGTAGCTATGTGAAGCACTGCGACTATGTGGCAATCTTCGATGCCGATTTCCGGCCAGAGCCTGACTTCTTGAGGCGAGCCATTCCTTTCTTGGTTGGCAATCCTGACATGGCCCTTGTCCAAGCACGTTGGAGATTTGTGAATGCAGACGAGTGTTTGTTGACAAGAATGCAAGAGATGTCCCTGGATTACCACTTCACAGTAGAGCAAGAAGTTGGGTCAGCCACTCATGCTTTCTTTGGCTTCAACGGGACAGCGGGTGTTTGGAGAATAGCTGCTATCAATGAAGCAGGGGGGTGGAAAGACAGAACAACGGTGGAAGATATGGACCTTGCTGTTCGTGCCAGTCTTAGGGGCTGGAAATTTCTGTACCTTGGGGACCTCCAGGCGAAAAGTGAGCTTCCAAGTACTTTGAGAGCCTTCAGATTCCAGCAGCACCGTTGGTCTTGTGGTCCTGCTAATCTCTTCCGCAAAATGGTGATGGAGATAGTAAGGAACAAGAAAGTGAAGTTTTGGAAGAAAGTGTACGTTATATACAGCTTCTTCTTTGTCCGCAAAATCATAGCTCACATGGTCACCTTCTTCTTCTACTGTGTCGTGCTTCCCCTTACAATTTTGGTCCCTGAGGTTCATGTTCCAATATGGGGTGCTGTTTATATTCCTTCCATCATCACCATTCTCAATTCAGTAGGAACACCAAGGTCCATTCACTTGTTGTTCTATTGGATCCTATTTGAGAATGTGATGTCATTGCACCGTACAAAGGCCACATTTATAGGCCTGCTTGAAGCTGGGAGAGCCAATGAATGGGTTGTTACTGAAAAACTTGGGGACTCAGTGAACAACAATAAGAATAAATCAGGAGATGCTGCTAAGAAGACTAATGTCAAGGCCTCTAATAAGAGGACTCGATCCAAATTTGTGGAAAGACTTAATGGATTGGAGCTGGGATTTGCTGCATTCCTGTTCCTCTGTGGATGCTATGATTTTGTGCATGGGAAAAACAACTACTTTGTGTACCTCTTCCTTCAGACCATAACCTTCTCAATTGTGGGATTTGGCTATGTTGGCACCATAGTGTAA 1626 0.4526 MVESQPKFFIPDSIQGVSYDIAGQIKMIWDVIKAPLIVPLLNLSVYICLAMALMLFIERLYMGVVIILVKLFWKKPEQRYKYEPIQDDVELGSSNFPVVLVQIPMFNEKEVYKVSIGAACNLSWPADRLVIQVLDDSTDPVIKQMVEMECQRWASKGINITYQIRENRTGYKAGALKEGLKRSYVKHCDYVAIFDADFRPEPDFLRRAIPFLVGNPDMALVQARWRFVNADECLLTRMQEMSLDYHFTVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLRGWKFLYLGDLQAKSELPSTLRAFRFQQHRWSCGPANLFRKMVMEIVRNKKVKFWKKVYVIYSFFFVRKIIAHMVTFFFYCVVLPLTILVPEVHVPIWGAVYIPSIITILNSVGTPRSIHLLFYWILFENVMSLHRTKATFIGLLEAGRANEWVVTEKLGDSVNNNKNKSGDAAKKTNVKASNKRTRSKFVERLNGLELGFAAFLFLCGCYDFVHGKNNYFVYLFLQTITFSIVGFGYVGTIV* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2424 541 SUPERFAMILY Nucleotide-diphospho-sugar transferases 94 378 IPR029044 -
Dod03g2424 541 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 88 316 IPR029044 -
Dod03g2424 541 PANTHER - 5 541 - -
Dod03g2424 541 PANTHER BNAC09G36340D PROTEIN 5 541 - -
Dod03g2424 541 Pfam Glycosyl transferase family group 2 190 399 IPR001173 -
Dod03g2424 541 CDD CESA_CaSu_A2 97 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2424 Dod-Chr3 55594172 55601153 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2424 5 541 Miscellaneous Gene Families AT5G22740 81.784 0.0 922
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2424 K13680 - gmx:100802752 1020.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2424 03 55594172 55601153 Dod03g2424 03 55594172 55601153 ECH
Dod10g1527 10 35962770 35969361 Dod03g2424 03 55594172 55601153 ECH