Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2414 ATAAGGGCGGCGAAGAGGGTGGTTCTGGTGAGGCACGGGCAGAGCACGTGGAACGCCGAGGGCAGGATCCAGGGGAGCTCCGACTTCTCCGTACTCACAAAGAAGGGCGAGTCTCAGGCCGAGACTTCCCGCCAAATGCTCATCGACGACCACTTCGATGCTTGCTTCGCAAGTCCTCTGGCTAGGTCCAAGAGAACGGCTGAGATCATATGGGGAGCTCGCAAGGAACCAATAATTCTGGAGTATGAATTGAGGGAGATCGATTTGTACTTGTTTCAAGGTCTTTTGAAGAATGAGGGGAAAGCGAAATTTGGTTCTGCTTATCGTCAATGGCAGGTAGATGCTGCGAATTTCGTCATTGATGGTCATTATCCGGTGAGGGAGCTATGGGAGCGTGCTAGGAGCTGCTGGAATAAAATCTTAGTACATGATAGCAGGTCTGTTCTTGTGGTTGCTCACAATGCTGTTAATCAGGCTCTTGTTGCTACAGCAATTGGTTTAGGGGTGGAGTATTTCAGATGTTTACTTCAGAGCAACTGCGGGGTAAGTGTGCTGGATTTTGTTCCTAGATCTGAGGGTGGCTCTCCACATATTTGCCTTAACCGCTTAAATCAGACCCCTGGTTCACCAGTGGCTGGCGGGAAATCTGGAGGTAGAGATTCAAGTAAGCGGATCATACTTGTTTGTAATGGATCTACACAGGGCAATACAGAGGATGGTTTTCCTTTTGCTGGTGATCAACCAATGAACATGCTTGGTGTCATACAGTCCCAGAAATCTGCAGAGCTACTTCTTGATTTGACAGTGAATTCCATAGTTAGCAGTCCTAACAAAGCTTGTGTTGAGACAGCCATGACCATCTCCAAGGTACAAGAAGCTGCAGATTGCTTGGGTGCTGACTGTGTGCCACGCTATGTTGAGTTGAAACAAATGGGTAGCCTTGATATTAAAACAATCTTTCAACAATCCAGAATGGCAAGTAACTCACTGATTGAGGATGAGCTGAGAACAACATTATGGGATCAATCTGGAAACGCCTGGCAATCCCTGTTGGATGAAATATCTGATGAATCTAGGCCAGAAGAAGTTTTAGTTGTAGTTGCTCATCCTGCAATCCACATAGCATTAATGGGGCACTGCCTTAACTTGACCAAAGAATGGTTGGGATCATTCCATCTTGATGCAGGGAGCATTAGTGTCCTTGACTTTCCTGATGGGCCTAAGAGAAGAGGTGTCATTAGGTGCATAAATTATACTGCACATTTGGGGAGATGGTCCATCCCCATTACAAGATCAACA 1299 0.4657 IRAAKRVVLVRHGQSTWNAEGRIQGSSDFSVLTKKGESQAETSRQMLIDDHFDACFASPLARSKRTAEIIWGARKEPIILEYELREIDLYLFQGLLKNEGKAKFGSAYRQWQVDAANFVIDGHYPVRELWERARSCWNKILVHDSRSVLVVAHNAVNQALVATAIGLGVEYFRCLLQSNCGVSVLDFVPRSEGGSPHICLNRLNQTPGSPVAGGKSGGRDSSKRIILVCNGSTQGNTEDGFPFAGDQPMNMLGVIQSQKSAELLLDLTVNSIVSSPNKACVETAMTISKVQEAADCLGADCVPRYVELKQMGSLDIKTIFQQSRMASNSLIEDELRTTLWDQSGNAWQSLLDEISDESRPEEVLVVVAHPAIHIALMGHCLNLTKEWLGSFHLDAGSISVLDFPDGPKRRGVIRCINYTAHLGRWSIPITRST 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2414 433 SUPERFAMILY Phosphoglycerate mutase-like 5 201 IPR029033 -
Dod03g2414 433 PANTHER 2-CARBOXY-D-ARABINITOL-1-PHOSPHATASE-RELATED 1 433 - -
Dod03g2414 433 CDD HP_PGM_like 224 414 IPR013078 -
Dod03g2414 433 Pfam Histidine phosphatase superfamily (branch 1) 225 406 IPR013078 -
Dod03g2414 433 Pfam Histidine phosphatase superfamily (branch 1) 7 188 IPR013078 -
Dod03g2414 433 Gene3D - 5 193 IPR029033 -
Dod03g2414 433 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 1 433 - -
Dod03g2414 433 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 9 18 IPR001345 GO:0003824
Dod03g2414 433 Gene3D - 217 426 IPR029033 -
Dod03g2414 433 SMART PGAM_5 224 376 IPR013078 -
Dod03g2414 433 SMART PGAM_5 6 160 IPR013078 -
Dod03g2414 433 CDD HP_PGM_like 6 193 IPR013078 -
Dod03g2414 433 SUPERFAMILY Phosphoglycerate mutase-like 222 427 IPR029033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2414 Dod-Chr3 55426142 55430313 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2414 K22200 - gmx:100794084 748.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2414 03 55426142 55430313 Dod03g2414 03 55426142 55430313 ECH