Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dod03g2406 | ATGCCCTCAAAAGCCAGTCTTGCTTATAAGCACGTAAGGCAAGGGGAAAGAGAGCTATTATTCCAAAGAAAAGAGAACAGGGAAAAGAGGAGAGAAACAACAAGGGAGAGGAAAAGCAGTGTTGTGGTTTGTGGTGCAGTAATGGCATCAACACCAAAACAGTCATGTGAGCAGCAACAACCGAATGCGCAGCGAGTGAGGAACTCGGGGAATATCAACTCCAACCAGAGCCCAACAGGGGATGACAAGGAAGAGGAGATGTCAAGATCAGCATTGGCTATGTTCCGAGCAAAGGAAGAAGAGATTGAGAGGAAGAAAATGGAGGTGAGGGATAAGGTTCATGCTTATTTGGGAAAAGTTGAAGAGGAAACAAAGCGCTTGGCTGAGATTAGAGAAGAGCTTGAGGGTCTTACAGATCCATTGAGGAAGGATGTTGCAATGGTTAGAAAGAAGATAGACATTGCTAACAAAGAGTTAAAGCCACTGGGCCATACCTGCCAAAGAAAGGAGAGAGAATACAAGGAAGCCCTTGAAGCTTTCAATGAGAAAAGCAGGGAAAAAGCTCAACTTGTTACAAAATTGATGGAGCTGGTGACTGAAAGTGAGAAGTTGAGGATGAAGAAGCTGGAGGAGCTAAGCAAAAATGTAGATAGCCTGCATTGA | 663 | 0.4434 | MPSKASLAYKHVRQGERELLFQRKENREKRRETTRERKSSVVVCGAVMASTPKQSCEQQQPNAQRVRNSGNINSNQSPTGDDKEEEMSRSALAMFRAKEEEIERKKMEVRDKVHAYLGKVEEETKRLAEIREELEGLTDPLRKDVAMVRKKIDIANKELKPLGHTCQRKEREYKEALEAFNEKSREKAQLVTKLMELVTESEKLRMKKLEELSKNVDSLH* | 221 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dod03g2406 | 220 | PANTHER | - | 57 | 219 | - | - | |
| Dod03g2406 | 220 | MobiDBLite | consensus disorder prediction | 20 | 90 | - | - | |
| Dod03g2406 | 220 | Coils | Coil | 166 | 186 | - | - | |
| Dod03g2406 | 220 | MobiDBLite | consensus disorder prediction | 20 | 38 | - | - | |
| Dod03g2406 | 220 | Pfam | Transcriptional activator | 67 | 218 | IPR007033 | - | |
| Dod03g2406 | 220 | PANTHER | RAB6-INTERACTING PROTEIN GORAB | 57 | 219 | IPR007033 | - | |
| Dod03g2406 | 220 | Coils | Coil | 113 | 133 | - | - | |
| Dod03g2406 | 220 | MobiDBLite | consensus disorder prediction | 51 | 78 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dod03g2406 | Dod-Chr3 | 55313962 | 55316572 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dod03g2406 | - | - | gmx:100796368 | 295.049 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Dod03g2406 | 03 | 55313962 | 55316572 | Dod03g2406 | 03 | 55313962 | 55316572 | ECH | |
| Dod01g2843 | 01 | 68687653 | 68691167 | Dod03g2406 | 03 | 55313962 | 55316572 | ECH |