Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2399 ATGGACTCAAGAAAGGCACAATACTTTCTCAACGAGAAGACTATTTTAGTCACTGGTGCGACTGGCTTCTTGGCGAAAGTTTTTGTGGAGAAGGTACTTCGGATCCAACCAAACATAAGCAGACTGTATCTTCTTCTCAGAGCTTCAAACACCGAGCTGGCAACACAACGCTTGCATAATGAGGTCATTCAAACAGATCTGTTTAAAGTGCTGCGTGATGAGCGGGGCGAAGAATTTGATTCTTTCATTTCAGAGAAGATTGTTGCCATAGCAGGTGATGTTTCACTCGAGAATTTAGGATTGAAAGATGCGAATCTTCAAAGGGAGATGTTCGAAAGAATTGACATCATTGTGAACTTCGCTGCATGTACCAAATTTGACGAAAGATTTGACATCGCAATGGGTGTTAACACAATGGGTGCTTTACAAGTCTTAAACTTCGCAAAGAATTGTCATAGAATACAGGTTCTTCTCCACGTTTCAACTGCTTATGTGTGCGGCGAGGCTAACGATAAAGAAGTAATTGTGCAAGAGAAACCATTTGAGATGGGTCAGACCCTGAAAGGTACCTCAAAATTAGACATTCACGGAGAAAAAAGAATTGCGGAGACAAAGTTAGCTGACCTTCAGGCAGAAAATGCTTGTGAAAAAACTATAGCATTTGCAATGAAAGATTATGGAATCAAAAGGGCAAAATTGTATGGATGGCCAAACACTTACGTGTTCACAAAGGCAATGGGGGAGATGCTTCTAGTGCATCTTAAAGATAAGGTACCACTGATCATTATACGGCCTACCATGGTAACTAGTACTTACAATGACCCCTTCCCCGGGTGGATTGAAGGTTTGAGAACAGTTGACAGCATTGTTGCTGCCTACGGTAAAGGAAAGATAAATTGCTTTCTTGGTCATCCCAATACAATTTTAGACGCGATACCTGCGGATATGGTGATCAATTGTGTGATCACCACAATTGTGACTCATTCAAATCAAAATGATCCACAAAATTTCATCTACCACGTTGCTTCTTCATCAAGAAACCCTCTCAGAATTTCCGATGTTCGTGATATCTCCTACCGTTATTTCACCAAAAGTCCGTGTACAGCTAAAAATGGCAAACCGATAATCGTCCGTAAGGCGAAACTTTTAACGAGTATGGCCGCTTTCAACAGATACATGAAGATCCGATGTGAACTACCACTAAAGGGCTTATATTTAGTCAACAAAGTGTCTTGCCAGTCATTCCAAGACATTTACACGTACAACCGCAAAAAAATCAGAACGGTGATGCGAATGGTAGAATTATACAAACCATACGTGCTTCTTAAAGCAATCTTTGATGACGCAAACACAGAAACATTACGGAGAGCAACAAAGGGTTATAAAATGCAGGGAATCGACTTAGACTTTGACCCCAAGAGTATTGATTGGACAGACTACATGATGAATGCACACGTTCCTGGTCTCTTCAAGTATGCCGTGAAGTAG 1488 0.4099 MDSRKAQYFLNEKTILVTGATGFLAKVFVEKVLRIQPNISRLYLLLRASNTELATQRLHNEVIQTDLFKVLRDERGEEFDSFISEKIVAIAGDVSLENLGLKDANLQREMFERIDIIVNFAACTKFDERFDIAMGVNTMGALQVLNFAKNCHRIQVLLHVSTAYVCGEANDKEVIVQEKPFEMGQTLKGTSKLDIHGEKRIAETKLADLQAENACEKTIAFAMKDYGIKRAKLYGWPNTYVFTKAMGEMLLVHLKDKVPLIIIRPTMVTSTYNDPFPGWIEGLRTVDSIVAAYGKGKINCFLGHPNTILDAIPADMVINCVITTIVTHSNQNDPQNFIYHVASSSRNPLRISDVRDISYRYFTKSPCTAKNGKPIIVRKAKLLTSMAAFNRYMKIRCELPLKGLYLVNKVSCQSFQDIYTYNRKKIRTVMRMVELYKPYVLLKAIFDDANTETLRRATKGYKMQGIDLDFDPKSIDWTDYMMNAHVPGLFKYAVK* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2399 495 PANTHER MALE STERILITY PROTEIN 2-RELATED 8 492 IPR026055 GO:0080019
Dod03g2399 495 Gene3D - 3 394 - -
Dod03g2399 495 CDD FAR-N_SDR_e 13 366 - -
Dod03g2399 495 CDD FAR_C 423 492 IPR033640 -
Dod03g2399 495 Pfam Male sterility protein 17 320 IPR013120 -
Dod03g2399 495 Pfam Male sterility protein 399 495 IPR033640 -
Dod03g2399 495 PANTHER FATTY ACYL-COA REDUCTASE 8 492 - -
Dod03g2399 495 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 332 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2399 Dod-Chr3 55174580 55184283 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2399 8 446 Acyl Lipid Metabolism Gene Families AT3G44560 52.154 3.54e-158 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2399 K13356 - gmx:100793736 570.466