Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2378 ATGGATCCGAAACCGAGTCACTCAACCCTAAAATCTTCGATCCATTCCCAAATTTTGGCAACAACCACAGCGAACTGCTCCTTGAAGAACGCGTTCCCAATGAAACGCACCGTTCGGCCACTCTTCGCGCTCCTCCTCCTCGTCGTCTTCGTCGCCACGCTCACCACGCGCGCCATGCTCCGCCGCCGCCTGCTCTCAATCGAGCTCGAAACGCGCGTCCTCATCCGCTACGCGCCGCCGGAGACTCCTCCTCCGCCACCACCGTCGCCGCCGCTGAACGCGACGCTGCTAAGCTTCGCCGCCATTCAAATCGGCGAAGAAAAAGCGAAGCAGGAGATCCAGCGGCTCCTCGACGGGAACTTCGGCAGCCAGGCCCGCCACCGGACCTTCGTCTCGTGGCGGCGGTTCATCCACCACGACGTCGCGGGTGGAGGATCCTCCCGGAGCAGCACAATTCCGGCGACGCTCCGTTCACCTCTGTTCTACCGTTACTGGCTCGATTTCCGGAAGGTTCTTAATGATTGGGCGAGGAAGAAACGATTCCAACCCGGTATCATGAACGAGTTGATTCGGTTGGTGAAAATCCCCATTGAAACACGCAAGGGCAGTTCACCTAGTAATTTACAAAAATACCCTTCTTGTGCTGTTGTTGGGAACAGTGGCATCTTGCTGAAAAATGATTATGGTTCTCTAATTGATTCACATGATGCTGTTATAAGGTTGAACAATGCAAGGGTTGATAACTTTGAGAAGAAGGTTGGGAAGAAAACTAGCATATCATTTGTGAATAGTAATATTTTGCATTTGTGTGCTAGAAGAGCAGGGTGCTTTTGCCACCCTTATGGTTCTGATGTTCCAATTGTTATGTATATTTGCCAGGCTGTGCATTTCTTGGATTACACTGTTTGCAATGGATCACACAAGGCACCACTTTTGGTAACTGATCCTAGGTTTGATGTGTTGTGTGCTAGGATTGTCAAGTATTACTCTTTGAAGAGGTTTGTGGAGGAGAGTGGGAAGGGTCTGGAGGAATGGGGTTCTTTTCATGATGGGGCTTTGTTTCATTACTCTTCAGGTATGCAGGCTGTCATGCTTGCCTTGGGGATTTGTGACAGAGTCAGCTTGTTTGGGTTCGGGAAATCGGCTTCTGCTAAGCACCATTACCATACTAACCAGAAGGCTGAGCTTCACTTGCATGATTATGAGGCTGAATATGAGCTCTACCGTGACCTTGTGGATGGGAAGAAGCCTATACCTTTTCTCTCGGAAAAGTTCAAGGTTCCTCCTGTTGTTATGTATCAATGA 1305 0.5004 MDPKPSHSTLKSSIHSQILATTTANCSLKNAFPMKRTVRPLFALLLLVVFVATLTTRAMLRRRLLSIELETRVLIRYAPPETPPPPPPSPPLNATLLSFAAIQIGEEKAKQEIQRLLDGNFGSQARHRTFVSWRRFIHHDVAGGGSSRSSTIPATLRSPLFYRYWLDFRKVLNDWARKKRFQPGIMNELIRLVKIPIETRKGSSPSNLQKYPSCAVVGNSGILLKNDYGSLIDSHDAVIRLNNARVDNFEKKVGKKTSISFVNSNILHLCARRAGCFCHPYGSDVPIVMYICQAVHFLDYTVCNGSHKAPLLVTDPRFDVLCARIVKYYSLKRFVEESGKGLEEWGSFHDGALFHYSSGMQAVMLALGICDRVSLFGFGKSASAKHHYHTNQKAELHLHDYEAEYELYRDLVDGKKPIPFLSEKFKVPPVVMYQ* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2378 434 Gene3D Glycosyl transferase family 29 157 417 IPR038578 -
Dod03g2378 434 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 33 434 - -
Dod03g2378 434 Coils Coil 391 411 - -
Dod03g2378 434 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 33 434 - -
Dod03g2378 434 Pfam Glycosyltransferase family 29 (sialyltransferase) 184 414 IPR001675 GO:0006486|GO:0008373
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2378 Dod-Chr3 54770766 54773347 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2378 209 378 Glycosyltransferase AT3G48820 25.294 4.94e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2378 K00786 - gmx:100789506 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2378 03 54770766 54773347 Dod03g2378 03 54770766 54773347 ECH