Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2377 TTGAAGGTTCATGAAACAAGGTCGCATGCTCATGCACCTGGGGAAGAAGAGAAGGTTATGACAAGGAAGCAGAAGGCTGAGAAGGCACATGAAGTGGAGCGTTCTCCTAAGAAGGCCAAGGTGGAAGAAAATGAGGATGATGGCCACACCAATGGAAAATCTACAGCTGATGTGGCAGCAGAATATGATGAGTTCTGCAAGGCCACAAACGAGCACCTTCCTGTTGAGCAAATGAAAGAGATTCTGGAGGCTAATGGCCTTGATTCCTCTGGCTCTGACATTGAAATCACAAGGAGATGCCAAGACTTGCTGTTTTATGGTGCATTAGAGAAATGCCCCATTTGCAATGGCAGTTTGGAGTTCGATGGCAGGCGTTATTCTTGCAGAGGGTTCTATAGTGAGTGGTCTAGCTGCACTTTCAGCACCAGAGACCCTCCAAGGAAAAAGGAATCTACTAAGCTACCAGATTCTGTTCAGAATTCTCTAGCTTCAGATTTGCTAAAGAAATACCAGGACCCTAGTCGCAGGCCTCACAGGGATTTAGGCTCAGCAGACAAGCCTTTTACTGGGATGATGATATCTCTGATGGGTCGTCTTTCTAGGACACATCATTATTGGAAAACAGCTATTGAAAAGCATGGAGGGAAGGTGGCAAACTCTATAATTGGGGCAACTTGTTTGGTGGCTTCACCTGCTGAAAGAGAACGTGGTGGCACATCCAAACTTGCAGAAGCCATGGAGAGGGGTATACATGTGGTAAGGGAGGCTTGGTTGACTGACAGCATTGAAAAGCAAGAACCGCAACCTTTGGAAGATTATGAACTTGTCTCTGATCTTTCTGTAGCTAGCAAGGGAATCCCCTGGGACAAACAAGATCCTGGGGAGGAGGCTATTGAATCACTCTCAGAACTCAAGCTTTATGGGAAGAGAGGGGTCTATAAAGATACCGAATTGCAGGACCTAGGAGGAAAGATATTTAAAAAGGATGGGATATTGTACAACTGTGCCTTCTCCCTATGTGACCAAGGGCGAGGACTGAATGACTACTGTGTCATGCAACTGATCATGGTTCCAGAGAATCGTTTGCATCTATACTTCAAGAAAGGGAGAGTAGGAGATGATCCAGATGCAGAGGAGAGGTTAGAAGAGAGGGATAATGTGGAAAATGCTCTGAAAGAGTTTGTGAGGCTCTTTGAGGAAATAACTGGAAATGAGTTTGAACCTTGGGAAAGAGAAAAGAAGTTCCAGAAGAAGCCAATTAAGTTTTACCCCATCGACATGGATGATGGAGTTGAAGTTCGGCATGGCGCACTGGGAGTTCGGCAGCTGGGGATAGCAGCAACACATTGTAAACTTGAGCCTATGGTTGCAAATTTTATGAAGGTTATGTGCAGCCAAGAGATATATAAGTATGCATTGATGGAGATGGGTTATGACTCTCCGGACCTTCCAATAGGAATGGTTACAAATCTTCACCTCAAAAGATGTGAGGAAGTTCTCCTAGAATTCACGGAGAAGGTGAAATCATTGAAAGAGACTGGACCAAAGGCTGAGGCTGTTTGGACTGATTTTAGCCAAAGATGGTTCACACTGATGCACTCCACACGGCCCTTCAATTTTAGAGATTACCAGGAGATTGCAGAACATGCTGCTGCTGCCTTAGAGGGTGTTAGGGACATAACCGTGGCTTCTCACCTCATAGGAGACATGAGTGGCTCCACCATTGATGACCCTTTATCAGATACATACAACAAATTGGGTTGCTCAATTTCTCACTTGGAGAAGGATTCGAATGACTACAATATGATTGTCAAATACCTTGAAAAAACTTATGAACCCGTCAAAGTTGGTGACATTGAATATGGGGTTTCTGTTGAGAACATATTTGCTGTGGAACCGAGTGCTTGCCCTTCTTATGAAGACGTAGTGAAGCTACCAAACAAGGTTCTTCTATGGTGTGGATCACGAAGCTCAAATCTGTTGAGGCACTTGCAAAAGGGGTTCTTGCCAGCTATATGTTCACTACCGGTGCCAGGTTACATGTTTGGCAAGGCTATTGTTTGTTCAGATGCTGCAGCAGAGGCTGCAAGATATGGTTTCACTGCTGTGGACAGGCCAGAAGGTTTCTTGGTTTTGGCCATTGCTTCTCTAGGGAAGGACATAACCGAATTGACAAGCCCACCTGAGGACACAACATCTTTGGAAGAAAAGAAGATTGGAGTGAAAGGACTGGGGAAGAAGAAAACAGATGAGTCAGAGCATTTTGTTTGGAAAGATGGCATAAAAGTTCCTTCAGGAAGAATAGTTGCATCAGAGCATAAGGATAGCCCCCTGGAATACAATGAGTATGCTGTCTATGATCCTAAACAG 2370 0.4473 LKVHETRSHAHAPGEEEKVMTRKQKAEKAHEVERSPKKAKVEENEDDGHTNGKSTADVAAEYDEFCKATNEHLPVEQMKEILEANGLDSSGSDIEITRRCQDLLFYGALEKCPICNGSLEFDGRRYSCRGFYSEWSSCTFSTRDPPRKKESTKLPDSVQNSLASDLLKKYQDPSRRPHRDLGSADKPFTGMMISLMGRLSRTHHYWKTAIEKHGGKVANSIIGATCLVASPAERERGGTSKLAEAMERGIHVVREAWLTDSIEKQEPQPLEDYELVSDLSVASKGIPWDKQDPGEEAIESLSELKLYGKRGVYKDTELQDLGGKIFKKDGILYNCAFSLCDQGRGLNDYCVMQLIMVPENRLHLYFKKGRVGDDPDAEERLEERDNVENALKEFVRLFEEITGNEFEPWEREKKFQKKPIKFYPIDMDDGVEVRHGALGVRQLGIAATHCKLEPMVANFMKVMCSQEIYKYALMEMGYDSPDLPIGMVTNLHLKRCEEVLLEFTEKVKSLKETGPKAEAVWTDFSQRWFTLMHSTRPFNFRDYQEIAEHAAAALEGVRDITVASHLIGDMSGSTIDDPLSDTYNKLGCSISHLEKDSNDYNMIVKYLEKTYEPVKVGDIEYGVSVENIFAVEPSACPSYEDVVKLPNKVLLWCGSRSSNLLRHLQKGFLPAICSLPVPGYMFGKAIVCSDAAAEAARYGFTAVDRPEGFLVLAIASLGKDITELTSPPEDTTSLEEKKIGVKGLGKKKTDESEHFVWKDGIKVPSGRIVASEHKDSPLEYNEYAVYDPKQ 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2377 790 SUPERFAMILY Domain of poly(ADP-ribose) polymerase 449 585 IPR036616 GO:0003950
Dod03g2377 790 ProSiteProfiles BRCT domain profile. 183 275 IPR001357 -
Dod03g2377 790 MobiDBLite consensus disorder prediction 1 52 - -
Dod03g2377 790 SMART WGR_cls 333 416 IPR008893 -
Dod03g2377 790 CDD parp_like 449 790 - -
Dod03g2377 790 ProSiteProfiles SAP motif profile. 70 104 IPR003034 -
Dod03g2377 790 Pfam WGR domain 333 412 IPR008893 -
Dod03g2377 790 Gene3D - 445 586 IPR036616 GO:0003950
Dod03g2377 790 SUPERFAMILY ADP-ribosylation 586 790 - -
Dod03g2377 790 Pfam Poly(ADP-ribose) polymerase, regulatory domain 450 583 IPR004102 GO:0003950
Dod03g2377 790 SMART BRCT_7 185 265 IPR001357 -
Dod03g2377 790 Pfam Poly(ADP-ribose) polymerase catalytic domain 597 790 IPR012317 GO:0003950
Dod03g2377 790 ProSiteProfiles WGR domain profile. 322 422 IPR008893 -
Dod03g2377 790 Gene3D - 587 790 - -
Dod03g2377 790 SUPERFAMILY WGR domain-like 299 427 IPR036930 -
Dod03g2377 790 CDD WGR_PARP1_like 323 429 - -
Dod03g2377 790 CDD BRCT_PARP1 188 263 - -
Dod03g2377 790 SMART PADR1_2 96 149 IPR012982 -
Dod03g2377 790 Coils Coil 493 513 - -
Dod03g2377 790 MobiDBLite consensus disorder prediction 139 158 - -
Dod03g2377 790 PANTHER POLY [ADP-RIBOSE] POLYMERASE 1 790 - -
Dod03g2377 790 ProSiteProfiles PARP alpha-helical domain profile. 449 568 IPR004102 GO:0003950
Dod03g2377 790 Pfam PADR1 (NUC008) domain 98 148 IPR012982 -
Dod03g2377 790 ProSiteProfiles PARP catalytic domain profile. 577 790 IPR012317 GO:0003950
Dod03g2377 790 Pfam BRCA1 C Terminus (BRCT) domain 185 262 IPR001357 -
Dod03g2377 790 SUPERFAMILY BRCT domain 172 286 IPR036420 -
Dod03g2377 790 MobiDBLite consensus disorder prediction 1 54 - -
Dod03g2377 790 PANTHER DNA LIGASE 1 790 - -
Dod03g2377 790 Gene3D BRCT domain 181 286 IPR036420 -
Dod03g2377 790 Gene3D - 54 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2377 Dod-Chr3 54765938 54769791 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2377 K10798 - gmx:548024 1422.53