Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2338 ATGCAGAGATCGTTTTGCGCGAAGAAGAAGAAGGAGGAACAGGAGAAGGCTGTGTGCTGGAACAACAACAACTCCTTCAGTGAACGTGGCATCGGCATCACTAGTTTTCTGGGATCAACTTTTGCGGCGATGACTCGTATTTTGGTTCAAAGGGGTTCTTCTGGTGGTGGTGGTTCTTCTTCTTCTTCTTCGAATCCAAACAACACAAGCCGTTCTGGGCCTTCTTCTAGGGTTGAGCCTCAGGTTGCTGTTGCTGTTACCCCAGCTGTGAGGGATGAGGAAAGTGGAGATGAGGTGCTTGGGGTTGTTGTTGGTGATGAGGTTTTGGAGAGTAGTGAGTGTACTAAGGGAAAAAGTGATGAGCTTTTGATGGGTGGTGGGGGCATTCACTTTGAGCAGGGTGGTGATGGTTCATCATGTGGTGATGATGATGATGTAGCTGCTGTTGTTGTTGACAAGGATGCTAAGGATGAGGTTGTGTGTCCAAGAGAGGTTGTGAAGAGGCTGAGTGGATTGAGGATCTCGAAAAGAGTGGATGTCGATGGCTCAAGTGGGGGCTCTTGTTCCCTCCCTGCTGGTGGGGTTAGTTCATGTCCGCCGCCTCCTCCTGTTCCGCCTCCTAAGCCTTCTGCGGCTAACTTGACCTCGAGGAGGAATGTGTCAGGGAGTTCGAATTCTGCCAGTGTAGGATCATCTAGAAGAGTGCCCGCTGCATGGCCTGTTGTTTCGTCTAGGACTTCGCCTACTGGGTCTCGGCCTTCTTCCCCGAGATCACATGACAGTGAGGGATACAATAGTGCTGATGAACAGAAGCCGTGCTTTGTATCCTCTTATGATGATTTTGAGAGAGAGCGAAAGTTTGAAATTGATATCAGAAGAGCAAAAGGTTATGAAGTAAAGAAAATGATGGAGGATGGAAATTGCCTTTTCCGTGCAGTTGCAGATCAGGTGTATGGGGACTCTGAAGTGTATGATTTGGTCAGACACATGTGCCTCAATTATATGGAGCAGGAGAGAGATCACTTTTCCCAATTTATAACAGAAGGCTTTACATCATACTGTAAGAGGAAGAGAAGAGATAAGGTCTACGGAAACAATGTTGAGATCCAAGCCATGTGTGAAATGTACAATCGCCCCATTCACATATACTCGTACACTACAGAACCTATCAATACCTTTCATGGAAGCTATAATACTGACACACCACCAATACGGCTGAGTTATCATCATGGGAATCATTACAACTCCCTTGTTGATCCACGGCGCTTGACAATTGGTGCTGGACTTGGATTTAGCTGTCTTCGTGGGGCAAATATTGACAAAGATCAAGTCAAGGCTGCTATTAAAGCTCAACAAGACCAACAGATCAATAATGCACTATTAGCTGAGGGACAACTTTATTCTGATGTTGAGCTCACGGAGAAGGAAATTGAACGAATGGTGATGGAAGTTTCTCGAGCTGAGTATCTTGCAGAATGCACATTTAAGCAACAGCTTGGCCACAGAGAGTCCTCCACCTCAAATGCTGAACCATCATCCTCTGGAGCAAGATCATCTGGCACTGGTCGCAAGATGGAACATGGGAAAGAGCATGGATCTGATCTTAGTAGCAGTAAGCAAATGTTACTGTCAATGGGCTTTAGTTATCTCCAAGCCATTGAGGCCTACAGCATATTTGGGGATAATGTTGAGTCTATGATTTGTTACCTGTTGGAAACTGGCAGCAGCAGCAGCAGACTTAAAGGCAAAGCCACTGAGTGA 1761 0.4628 MQRSFCAKKKKEEQEKAVCWNNNNSFSERGIGITSFLGSTFAAMTRILVQRGSSGGGGSSSSSSNPNNTSRSGPSSRVEPQVAVAVTPAVRDEESGDEVLGVVVGDEVLESSECTKGKSDELLMGGGGIHFEQGGDGSSCGDDDDVAAVVVDKDAKDEVVCPREVVKRLSGLRISKRVDVDGSSGGSCSLPAGGVSSCPPPPPVPPPKPSAANLTSRRNVSGSSNSASVGSSRRVPAAWPVVSSRTSPTGSRPSSPRSHDSEGYNSADEQKPCFVSSYDDFERERKFEIDIRRAKGYEVKKMMEDGNCLFRAVADQVYGDSEVYDLVRHMCLNYMEQERDHFSQFITEGFTSYCKRKRRDKVYGNNVEIQAMCEMYNRPIHIYSYTTEPINTFHGSYNTDTPPIRLSYHHGNHYNSLVDPRRLTIGAGLGFSCLRGANIDKDQVKAAIKAQQDQQINNALLAEGQLYSDVELTEKEIERMVMEVSRAEYLAECTFKQQLGHRESSTSNAEPSSSGARSSGTGRKMEHGKEHGSDLSSSKQMLLSMGFSYLQAIEAYSIFGDNVESMICYLLETGSSSSRLKGKATE* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2338 586 MobiDBLite consensus disorder prediction 195 210 - -
Dod03g2338 586 PANTHER OTU DOMAIN-CONTAINING PROTEIN 5-LIKE ISOFORM X1 101 549 - -
Dod03g2338 586 MobiDBLite consensus disorder prediction 212 232 - -
Dod03g2338 586 MobiDBLite consensus disorder prediction 242 261 - -
Dod03g2338 586 ProSiteProfiles OTU domain profile. 297 420 IPR003323 -
Dod03g2338 586 SUPERFAMILY Cysteine proteinases 290 420 IPR038765 -
Dod03g2338 586 MobiDBLite consensus disorder prediction 500 520 - -
Dod03g2338 586 PANTHER OTU DOMAIN CONTAINING PROTEIN 101 549 - -
Dod03g2338 586 MobiDBLite consensus disorder prediction 178 270 - -
Dod03g2338 586 MobiDBLite consensus disorder prediction 51 80 - -
Dod03g2338 586 Gene3D - 279 430 - -
Dod03g2338 586 MobiDBLite consensus disorder prediction 500 536 - -
Dod03g2338 586 MobiDBLite consensus disorder prediction 52 77 - -
Dod03g2338 586 Pfam OTU-like cysteine protease 305 414 IPR003323 -
Dod03g2338 586 SUPERFAMILY UBA-like 538 574 IPR009060 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2338 Dod-Chr3 54263637 54269391 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2338 K12655 - gmx:100780250 666.766