Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2337 ATGTTCAATTTTGAAAACAAAGGTGGTGCAGGAAGTAACCATCTAGATGGAAGTAAAGAATTGCTGAAGAATTTGTTGGCTGAACTTGAACAAATACTTATACACACCAACTTACCTTATCCTGTTTATTTTGCTTTTGAGGATGACAACATTAATGCTGCATTAGCTGATATCAAGAAGAGTGATGCCACTGGTCAGCCTGCTACTGCAACTACTGGCGGATATAAATTTGTAGTTTCAACTCCAGAACCAAAGAAAGTTGCATCTCCTCCCATTACAAATATCCAGGGATGGTTGGCAGGACTGAAGACAGGTGATGATGCTCGTCAATTACCCACCATTGCGATAGTGGCATCATATGACACCTTTGGGGCTGCTCCTGCATTATCAGTGGGAAGCGATAGCAATGGAAGTGGAGTTGTGGCTCTTCTTGAAGTAGCTAGGTTGTTTTCTCTTTTGTATTCTAATCCAAAGACAAGAGGACAATACAATCTGTTATTTGGGCTAACATCTGGTGGGCCTTACAACTACAATGGAACTCGTAAGTGGCTTCGGAGCTTTGATCAACGACTGCGTGAGAGCATTGACTATGCTGTTTGCTTAGATAGTGTTGGCTCATGGGAAAATGAATTGTGGATTCATGTGTCTAAGCCTCCAGAAAATGCTTACATTAAGCAAATTATGGAAGATTTTTCAAGTGTTGCAGAAGAGTTGGGCTTCAAAGTGAATCTTAAGCATAAGAAAATAAATATCTCAAATCCTCGAGTAGCTTGGGAGCATGAACAGTTTTCAAGGCTGAGAGTTACTGCTGCTACTCTCTCTGAACTCTCTGCTGCACCTGAACTGCTAGAAAGGACTGGTGGTTTGGTTGACAGCAGGCATTTTGTAGACGAAAAGGCAATTATCAGAAGTGTGAAACTAATTGCTGAGAGTCTTGCGAGGCATATTTATGGACATCAAGGAAAGAACGTCCAAATCTTTGCAGACAACAGCAACTTGGCTGTAAATCCTTCTTATGTTCGGTCATGGTTAGACGTTTTGTCCCAAACACCTCGAGTGGCACCATTTTTCTCAAAAGATGATCCTTTTGTCATGGCACTGAAAAAGGAATTGGAAGACCATACTGATGAGGTCAATGTCCAACGTGAAGTGCTAGATGGAATGTTCACTTTCTATGATTCAACTAGGGCAAAGCTGAACATATATCAGGTTGCCAGTGTCACATTCGACTTGCTGTTGCTTCTTGTATTGGGATCATATTTAATTGTGCTCTTCAGTTTCTTGGTCATCACAACAAGGGGTCTTGATGATCTGATTAGTTTGTTCCGGCGGCCTCCCTCTCGAAAAGTGAAGACTGCATAG 1362 0.4163 MFNFENKGGAGSNHLDGSKELLKNLLAELEQILIHTNLPYPVYFAFEDDNINAALADIKKSDATGQPATATTGGYKFVVSTPEPKKVASPPITNIQGWLAGLKTGDDARQLPTIAIVASYDTFGAAPALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGQYNLLFGLTSGGPYNYNGTRKWLRSFDQRLRESIDYAVCLDSVGSWENELWIHVSKPPENAYIKQIMEDFSSVAEELGFKVNLKHKKINISNPRVAWEHEQFSRLRVTAATLSELSAAPELLERTGGLVDSRHFVDEKAIIRSVKLIAESLARHIYGHQGKNVQIFADNSNLAVNPSYVRSWLDVLSQTPRVAPFFSKDDPFVMALKKELEDHTDEVNVQREVLDGMFTFYDSTRAKLNIYQVASVTFDLLLLLVLGSYLIVLFSFLVITTRGLDDLISLFRRPPSRKVKTA* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2337 453 CDD M28_nicalin_like 26 319 - -
Dod03g2337 453 ProSitePatterns EF-hand calcium-binding domain. 134 146 IPR018247 -
Dod03g2337 453 SUPERFAMILY Zn-dependent exopeptidases 74 297 - -
Dod03g2337 453 Pfam Nicastrin 114 251 - -
Dod03g2337 453 Gene3D Zn peptidases 23 311 - -
Dod03g2337 453 PANTHER NICALIN 19 452 IPR016574 GO:0009966|GO:0016020
Dod03g2337 453 PANTHER NICALIN 19 452 - -
Dod03g2337 453 Coils Coil 364 384 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2337 8 451 EF-hand Containing Proteins AT3G44330 76.802 0.0 703
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2337 - - gmx:100778865 794.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2337 03 54248003 54254693 Dod03g2337 03 54248003 54254693 ECH