Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2296 ATGTTTGTTTTGCATGTGTTTGAGAGTAGTGATCCGGGGCCTGGGTCTAATGAAATGACGGCTGAAGAAATGAGAAAGCAACAGAAGAGGGAGGAGGCACTGCATGCTAGCAGTCTCCGGGTTCCTCGCAGGCCACCATGGAATGCTGAGATGTCTGTGGAGGAGCTTGATGCTAATGAAAGACAAGCTTTCTTGACTTGGCGTCGCAGCCTGGCAAGACTTGAGGAAAATAAGACGCTTGTCCTCACACCATTTGAGAAAAATCTTGATATTTGGAGACAGCTCTGGCGGGTTGTTGAACGCAGTGATTTGCTTGTTATGGTTGTTGATTCACGAGATCCACTGTTCTATCGCTGTCCTGATCTTGAGGCTTATGCACAAGAGGTTGACAAGCATAAACGCACTTTGCTTCTGGTTAATAAGGCAGATCTTTTACCTGCTTCTATCAGAGAAAAATGGGCAGAATATTTTCGTGCTCATGATATTCTCTTCATTTTCTGGTCTGCTAAAGCTGCTTCTGCAGCTCTTGAAGGCAAAAAGCTTGGTTCATCATGGGAGGCTGCTAACTTGGGGAGAAGCAATAACCCAGACACAGAGATTTATGGAAGGGATGAGCTTTTGGCCCGCCTGCAGTCAGAAGCGGAAGAGATAGTTGAAATGAGAAGAAATTCAAGCTCCTCTGATGCAGGGCCATCTAACGTAAAATCTCCTGGTGAAAATGCTGCTGGCAGTTCATCATCAAGTAATGTAACTGTGGGATTTGTTGGATATCCTAATGTGGGGAAAAGTTCAACTATAAATGCTCTTGTTGGTCAAAAAAGGACTGGTGTCACCTCTACTCCGGGGAAAACCAAGCACTTCCAGACCTTAATCATTTCTGAGAAACTGACCCTTTGCGACTGCCCTGGATTAGTCTTTCCATCATTCTCAAGCTCAAGATATGAGATGGTCGCATGTGGCGTGTTGCCTATTGATAGGATGACAGAACACAGGGAGTCTGTCCAAGTTGTAGCTGATAGAGTCCCAAGGCACGTCATTGAGAAGGTTTATAACATCAGTCTTCCTAAGCCTAAGCCGTATGAGCCCCAATCCCGGCCCGCTTTGGCATCTGAGCTTCTGAGAGCATATTGCACGTCTCGTGGGTATGTCGCCTCTAGCGGACTGCCTGATGAAACTAGGGCTGCGCGTCAGATACTGAAAGATTACATTGATGGCAAGCTGCCTCACTATCAAATGCCCCCTGGTGTGTCAAACGAGGAACCAGCTTTGGAAGATCACACAGTACATGACTCAGTTAGCTCGCATGAGTCAGATTCATCTGGTATTGAAGAGTCTTCAGATGTTGAGGGTGAAGCTGCACCAAATCTTGAAGATGTATTGGATGACCTCAATTCATTTGACATGGCTAATGGACTTGCTTCAAAGAAAGTTACTGATAAGAAGGCTAAGGCATCTCATAAGCAGCATAAAAAGCCTCAGAGGAAAAAAGATCGTTCATGGAGAGCAGGGAATGATGATGGTGATGGAATGCCAGTTGCAAGATTCTTTCAGAAACCGGTAAATACAGGCCCAATGAATGTGTGA 1584 0.4558 MFVLHVFESSDPGPGSNEMTAEEMRKQQKREEALHASSLRVPRRPPWNAEMSVEELDANERQAFLTWRRSLARLEENKTLVLTPFEKNLDIWRQLWRVVERSDLLVMVVDSRDPLFYRCPDLEAYAQEVDKHKRTLLLVNKADLLPASIREKWAEYFRAHDILFIFWSAKAASAALEGKKLGSSWEAANLGRSNNPDTEIYGRDELLARLQSEAEEIVEMRRNSSSSDAGPSNVKSPGENAAGSSSSSNVTVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISEKLTLCDCPGLVFPSFSSSRYEMVACGVLPIDRMTEHRESVQVVADRVPRHVIEKVYNISLPKPKPYEPQSRPALASELLRAYCTSRGYVASSGLPDETRAARQILKDYIDGKLPHYQMPPGVSNEEPALEDHTVHDSVSSHESDSSGIEESSDVEGEAAPNLEDVLDDLNSFDMANGLASKKVTDKKAKASHKQHKKPQRKKDRSWRAGNDDGDGMPVARFFQKPVNTGPMNV* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2296 527 MobiDBLite consensus disorder prediction 22 37 - -
Dod03g2296 527 MobiDBLite consensus disorder prediction 480 497 - -
Dod03g2296 527 Gene3D - 91 308 IPR027417 -
Dod03g2296 527 MobiDBLite consensus disorder prediction 471 527 - -
Dod03g2296 527 Gene3D - 311 413 IPR023179 -
Dod03g2296 527 Coils Coil 203 223 - -
Dod03g2296 527 MobiDBLite consensus disorder prediction 8 37 - -
Dod03g2296 527 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 92 307 IPR030378 GO:0005525
Dod03g2296 527 PANTHER - 20 522 - -
Dod03g2296 527 PANTHER LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED 20 522 IPR043358 GO:0003924
Dod03g2296 527 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 90 340 IPR027417 -
Dod03g2296 527 PRINTS GTP1/OBG GTP-binding protein family signature 298 313 IPR006073 GO:0005525
Dod03g2296 527 PRINTS GTP1/OBG GTP-binding protein family signature 252 272 IPR006073 GO:0005525
Dod03g2296 527 CDD HSR1_MMR1 91 307 - -
Dod03g2296 527 MobiDBLite consensus disorder prediction 218 248 - -
Dod03g2296 527 MobiDBLite consensus disorder prediction 409 451 - -
Dod03g2296 527 Pfam 50S ribosome-binding GTPase 252 308 IPR006073 GO:0005525
Dod03g2296 527 MobiDBLite consensus disorder prediction 422 442 - -
Dod03g2296 527 MobiDBLite consensus disorder prediction 223 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2296 Dod-Chr3 53407593 53410797 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2296 K14539 - gmx:100817523 836.639