Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2257 TTTGCGTACAGTACAGGGGTTTCTTTTCTCTCTCTTCTCCACTCTTCTCGCTCCTCCGGTAACCGATACATTACAGGCTTTTCATTTTCCATTGCAAATTTCGTTCTTCTCTTCTTCTTTTTTTCTCCATCGATCGTTGCCCTGGTAGCAAGAATTATTGCCATGGCTAAGAGCTCATTCAAGATGGAACACCCACTTGAAAGGAGGCAGGCTGAGGCAGCTCGCATAAGAGAGAAGTATCCCGATAGAATTCCTGTAATTGTTGAAAGGGCAGAGAAGAGCGATGTTCCTGAAATTGATAAGAAAAAGTATCTGGTTCCTGCTGATCTGACTGTTGGACAGTTTGTGTATGTGGTGCGGAAGCGAATCAAGCTGAGTCCTGAAAAGGCCATCTTCGTCTTTGTCAAGAACATTTTACCACCAACTGCGGCTATAATGTCTGCAATATACGAGGAAAATAAGGATGAAGATGGATTCTTGTATATGACTTACAGCGGAGAGAACACATTTGGGGTGATGATCTGA 525 0.4324 FAYSTGVSFLSLLHSSRSSGNRYITGFSFSIANFVLLFFFFSPSIVALVARIIAMAKSSFKMEHPLERRQAEAARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFVFVKNILPPTAAIMSAIYEENKDEDGFLYMTYSGENTFGVMI* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2257 174 SUPERFAMILY Ubiquitin-like 57 171 IPR029071 -
Dod03g2257 174 Gene3D - 49 172 - -
Dod03g2257 174 CDD Ubl_ATG8 66 168 - -
Dod03g2257 174 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 48 171 IPR004241 -
Dod03g2257 174 PANTHER AUTOPHAGY-RELATED PROTEIN 48 171 - -
Dod03g2257 174 Pfam Autophagy protein Atg8 ubiquitin like 68 171 IPR004241 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2257 Dod-Chr3 52905918 52909069 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2257 K08341 - pop:7489899 224.942