Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2253 ATGGCAGAACCCAAAGTTAAATACGATCGCCAGCTCAGAATATGGGGTGACCAAGGACAGGCAGCCCTTGAGAAATCTAGTATTTGCCTACTTAACTGTGGTCCTACTGGCTCTGAAACACTTAAGAATCTTGTTCTTGGTGGGATTGGAAGTATCACCGTAGTTGATGGATCAAAAGTTGAAGTGGGTGACCTTGGGAACAATTTTTTGGTTGATGGATCAAGTGTTGGGCAATCAAAGGCAAAATGTGTATGCTCATTTCTTCAAGAGCTGAATGATTCTGTTAAAGCAAAATTTGTAGAGGAGTGTCCGGATGCATTGATTGAAACAAATCCATCATTCTTTTCTCAATTTACTTTGGTTGTTGCCACACAGCTTGTGGAAAGTTCAATGATAAAGCTTGATCGAATCTGCCGAGAAGCGAATGTTATTTTGATCTTTGCTCGCTCCTATGGCCTTACAGGGTTTGTTCGAATTAGTTTGAAGGAACATACTGTGATTGAGTCAAAGCCTGAACATTTCCTGGATGACCTCCGGTTAAATAATCCTTGGCCTGAACTAAAGGGGTTTGCAGACGGCATTGACTTGAATGTGCAAGATCCTGTTGCCCATAAGCACATACCATATGTTGTCATTCTTGTCAAGATGGCTGATGAGTGGGCCAAAAGCCATGGTGGTAAGCTTCCTTCAACAAGAGAACAAAAAAAGGAGTTCAAGGATCTTCTGAAGGCCAGGATGGTAGCACAAGATGAAGATAACTATAAAGAAGCAATTGAGGCCGCATTCAAAGTATTTGCTCCACGAGGAATTAGTATGGATTTGCAACAGATACTGAATGATAGTTCTGCTGAAGTGGATTCTAGTTCATCAGATTTTTGGGTGATGGTAGCTGCTCTGAAGGAATTCATTGCAAATGAAGGTGGTGGGGAGGCACCTCTCGAAGGATCTATACCAGATATGACTTCCTCTACTGAGCAATATGTGAATTTGCAGAATATCTATCAAGCTAAGGCGGAGGCTGACTTTCTTGTAATGGAACGACTAGTGAGAAGTACTTTGAAGAAGATTGGTAGAGATTCAAATAGCATTCCAAGGACAACAATTAAAAGCTTCTGTAAAAATGCAAGAAAACTCAAAGTTTGCAGGTACCGCCTGATTGAAGATGAGTTTCATTCTCCAAACCTACCTGAGTTGCAGAAGTACCTAACTGACGAGGATTACAGCATTGCTGTAGGAATTTATATTTTGCTTCGCGCTGTGGATCGGTTTGCTGCTAATTACAACAGTTTTCCTGGACAGTTTGACAGTGCAATGGATGAGGATATACCTCGACTAAAGAGCACAGCTATTGGCCTCCTCAGTGACCTGGGATGTAATGGAGCCATTTTGGCTGAGGACCTTATCAATGAGATGTGTCGATTTGGTGCTGCAGAGCTTCATGCTGTGGCTGCTTTGGTTGGAGGAATGCATCACAAGAAGTGA 1482 0.4217 MAEPKVKYDRQLRIWGDQGQAALEKSSICLLNCGPTGSETLKNLVLGGIGSITVVDGSKVEVGDLGNNFLVDGSSVGQSKAKCVCSFLQELNDSVKAKFVEECPDALIETNPSFFSQFTLVVATQLVESSMIKLDRICREANVILIFARSYGLTGFVRISLKEHTVIESKPEHFLDDLRLNNPWPELKGFADGIDLNVQDPVAHKHIPYVVILVKMADEWAKSHGGKLPSTREQKKEFKDLLKARMVAQDEDNYKEAIEAAFKVFAPRGISMDLQQILNDSSAEVDSSSSDFWVMVAALKEFIANEGGGEAPLEGSIPDMTSSTEQYVNLQNIYQAKAEADFLVMERLVRSTLKKIGRDSNSIPRTTIKSFCKNARKLKVCRYRLIEDEFHSPNLPELQKYLTDEDYSIAVGIYILLRAVDRFAANYNSFPGQFDSAMDEDIPRLKSTAIGLLSDLGCNGAILAEDLINEMCRFGAAELHAVAALVGGMHHKK* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2253 493 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 2 489 IPR045886 -
Dod03g2253 493 PANTHER NEDD8-ACTIVATING ENZYME E1 REGULATORY SUBUNIT AXR1 2 489 - -
Dod03g2253 493 CDD APPBP1_RUB 7 387 - -
Dod03g2253 493 Pfam ThiF family 8 160 IPR000594 -
Dod03g2253 493 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 7 489 IPR035985 GO:0008641
Dod03g2253 493 Gene3D - 351 490 - -
Dod03g2253 493 Gene3D - 2 271 - -
Dod03g2253 493 PIRSF APP-BP1 1 491 IPR030667 GO:0019781|GO:0045116
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2253 Dod-Chr3 52808620 52827378 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2253 7 78 EF-hand Containing Proteins AT2G30110 33.766 2.54e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2253 K04532 - gmx:100793799 896.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2253 03 52808620 52827378 Dod03g2253 03 52808620 52827378 ECH