Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2250 ATGTCTTCTTCACTCCTCAGATCTAGCACTAGCAGGGCCAAGCTCTTCTGTTCCTCTCTTTCTAGAACCTTCTCCTCCTCCCTCCCCCCTCCCCACATCGGAGCACTCCCTTCCCTCTCCCACCGCACCTCCGCCACTCTCTCTCCCGGGAATGAAAATGCTCCCCCCAAACCTAATGCCAGCGAGTTTGGAAATCTCTACGGGCTTCGTCCTCTAAGCGATCCAATTAACAAGCTTGGCACTGATTCTGATAAATTCAATCTTCCGAATTACAATGCTCTAGGACTGGACATCCTTTCGCAGGCCAGAGCTGGAAATGGTCTTGGAAGTTCGAGAGTTTGGGCTGCCAATGGTCCTGTGCTATTGGGAGTCAGAGGTCCATATGCTGACACATTGGGACTGACCGGTCATAAACGTATTATGAGTACTGTCACGAGCACAACCAATGAGACAAAGTCGTATAGTCTTCGCCCATTATCTCCTCATCTTCCCATTTATCAGCCGCAGCTATCTTCGACTCTTTCAATTTTCAATAGAATCTCTGGAGCAATCCTAGCCGCTGTCATCTTGCTATTTTACATGATATATATGAAACTGGGTTTGGTTAGCCTCACCTACGATTCTTTCTACCAGTTCTTATTTTATTCATCATATTCAAAACTCAACCTGCTTGTCCTTGAGATTTCTGGCTTAGCCCTGACCTATCACTTGTATATGGGCATTCGCCATCTACTCCATTTACTATAA 747 0.4645 MSSSLLRSSTSRAKLFCSSLSRTFSSSLPPPHIGALPSLSHRTSATLSPGNENAPPKPNASEFGNLYGLRPLSDPINKLGTDSDKFNLPNYNALGLDILSQARAGNGLGSSRVWAANGPVLLGVRGPYADTLGLTGHKRIMSTVTSTTNETKSYSLRPLSPHLPIYQPQLSSTLSIFNRISGAILAAVILLFYMIYMKLGLVSLTYDSFYQFLFYSSYSKLNLLVLEISGLALTYHLYMGIRHLLHLL* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2250 248 CDD SQR_TypeC_SdhC 157 245 - -
Dod03g2250 248 MobiDBLite consensus disorder prediction 35 65 - -
Dod03g2250 248 PANTHER SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT, MITOCHONDRIAL 100 245 - -
Dod03g2250 248 Pfam Succinate dehydrogenase/Fumarate reductase transmembrane subunit 157 245 IPR000701 GO:0016627
Dod03g2250 248 MobiDBLite consensus disorder prediction 39 55 - -
Dod03g2250 248 PANTHER SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT 100 245 IPR014314 GO:0000104|GO:0006099|GO:0009055|GO:0045281
Dod03g2250 248 SUPERFAMILY Fumarate reductase respiratory complex transmembrane subunits 152 245 IPR034804 GO:0016020
Dod03g2250 248 Gene3D Fumarate reductase/succinate dehydrogenase, transmembrane subunit 140 246 IPR034804 GO:0016020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2250 K00236 K03885 gmx:100499683 219.55