Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2245 ATGGGTTCCCCTTCAGTGAACCATGATGTTGATCAACCTTTGCTTGAACCTTCCACCCCACCACCGCCGCCGCCACAACCATCTTCATCATTCAGCTCAAAGTATCACGAATCAAATGGTGAGCTTGAGAGAATACTCTCAGACACAAGTGTTCCTTTCATAAAGCGCCTTGGACCAGCTACATGGCTTGAGTTGAAGCTCCTATTTCACCTTGCCGCCCCTGCAGTCGTAGTGTATCTCCTCAACAATGTCATGTCTATGTCCACACAAATCTTCTCTGGACACCTTGGTAACCTTGAGCTTGCTGCTGCTTCCCTTGGAAACACTGGCATCCAAGTCTTTGCTTATGGCCTCATGTTGGGTATGGGGAGTGCTGTTGAGACTCTATGTGGACAAGCATTTGGGGCACACAAGTTTGAAATGCTAGGCATATACTTGCAGAGATCAACAATCCTTCTCACACTAGCAGGTGTTGTTTTGACTTTGATATATGTCTTCTCTGAGCCAATTTTGGTCTTTCTAGGTGAGTCCCCAAGGATAGCATCTGCAGCAGCACTTTTTGTCTATGGCCTGATCCCACAAATATTTGCCTATGCTGTGAATTTCCCAATACAAAAGTTCCTTCAGGCTCAAAGCATAGTGGCTCCAAGTGCATACATATCTACAGCAACATTAGCCATCCACCTTGTGCTGAGTTGGCTGATTGTGTATGAGGTAGGGCTTGGCCTATTGGGGGCATCATTGGTTTTGAGCTTGTCATGGTGGATCATTGTGATTGCACAATTTGTGTATATTGTGAAGAGTGAAAGGTGTAAGCACACATGGAAAGGGTTCACTATGCAAGCCTTTTCAGGGTTACCAGAGTTCTTTAAGCTGTCTGCTGCATCAGCAGTGATGTTGTGCCTAGAGACATGGTACTTTCAGATTATGGTTTTGATTGCAGGGTTGCTGCCTCACCCTGAGTTGGCTCTGGATTCCCTTTCTATTTGTACCACAGTGTCTGGATGGGTGTTCATGATCTCAGTTGGATTTAACGCTGCTGCAAGTGTGAGAGTGAGCAACGAGCTAGGAGCAAAAAATCCAAAATCAGCATCATTCTCGGTGGTGGTGGTGACAACGATTTCGTTCATATTATCGGTAATCATAGCACTGGTGGTGCTTGCATTGCGTGATGTGATTAGCTACGTCTTCACAGAAGGCGAAGAGGTCGCTGCTGCTGTCTCAGATCTTACCCCACTCCTCGCTCTTTCCATCGTCCTCAACGGCATTCAGCCTGTCTTATCAGGGGTGGCCGTTGGATGTGGATGGCAAGCCTTTGTTGCATATGTAAACGTTGGTTGTTACTATGGAATCGGCATACCATTGGGTTCCGTTTTAGGTTTCTATTTCCAATTCGGTGCTAAGGGAATATGGCTTGGAATGCTAGGTGGCACAGTTTTGCAAACACTTATTTTATTGTGGATGACATTTAGAACGAATTGGAATAAAGAGGTTGAAGAAGCATCCAAGAGGTTGAGCAAGTGGGAAGACAAGACAGAACCTCTGCTCAAGAACTGA 1557 0.4579 MGSPSVNHDVDQPLLEPSTPPPPPPQPSSSFSSKYHESNGELERILSDTSVPFIKRLGPATWLELKLLFHLAAPAVVVYLLNNVMSMSTQIFSGHLGNLELAAASLGNTGIQVFAYGLMLGMGSAVETLCGQAFGAHKFEMLGIYLQRSTILLTLAGVVLTLIYVFSEPILVFLGESPRIASAAALFVYGLIPQIFAYAVNFPIQKFLQAQSIVAPSAYISTATLAIHLVLSWLIVYEVGLGLLGASLVLSLSWWIIVIAQFVYIVKSERCKHTWKGFTMQAFSGLPEFFKLSAASAVMLCLETWYFQIMVLIAGLLPHPELALDSLSICTTVSGWVFMISVGFNAAASVRVSNELGAKNPKSASFSVVVVTTISFILSVIIALVVLALRDVISYVFTEGEEVAAAVSDLTPLLALSIVLNGIQPVLSGVAVGCGWQAFVAYVNVGCYYGIGIPLGSVLGFYFQFGAKGIWLGMLGGTVLQTLILLWMTFRTNWNKEVEEASKRLSKWEDKTEPLLKN* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2245 518 MobiDBLite consensus disorder prediction 1 35 - -
Dod03g2245 518 MobiDBLite consensus disorder prediction 15 29 - -
Dod03g2245 518 PANTHER MULTIDRUG RESISTANCE PROTEIN 23 505 - -
Dod03g2245 518 TIGRFAM matE: MATE efflux family protein 74 471 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod03g2245 518 Pfam MatE 296 456 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod03g2245 518 Pfam MatE 74 234 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod03g2245 518 PANTHER PROTEIN DETOXIFICATION 23 505 - -
Dod03g2245 518 CDD MATE_eukaryotic 64 500 IPR045069 GO:0042910|GO:1990961
Dod03g2245 518 Coils Coil 491 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2245 Dod-Chr3 52574825 52588450 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2245 K03327 - gmx:100801718 846.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2245 03 52574825 52588450 Dod03g2245 03 52574825 52588450 ECH
Dod10g1376 10 33978250 33982691 Dod03g2245 03 52574825 52588450 PCT