Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2236 ATGGCGACTCTTGATTCCGACGTGCCGATGGTCCCCGCCGGCGAGCCCTCAAGCAGCGCCGGCCCTTCCTCAAAGAAACCGAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCGCTCTCTGGGCTTGGGACATCGTCGTTGATAACTGTGCTATCTGCAGGAACCACATCATGGATCTCTGCATTGAGTGCCAAGCTAACCAGGCTAGTGCCACCAGCGAGGAATGCACTGTGGCTTGGGTGTGTGGGGGGGCTACAAGAATGTGGGGGTCCACATCTACACTAGCACCAAGAGAGTGCAAGCTAAACAACTCTGGTGTGAAGGTTCCAGAATCACATCATAAGCTATACTCATGCTCATCACACAGTTGA 372 0.543 MATLDSDVPMVPAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWVCGGATRMWGSTSTLAPRECKLNNSGVKVPESHHKLYSCSSHS* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2236 123 Pfam Anaphase-promoting complex subunit 11 RING-H2 finger 30 67 IPR024991 GO:0005680|GO:0008270|GO:0031145|GO:0061630|GO:0097602
Dod03g2236 123 PANTHER RING BOX 1 106 - -
Dod03g2236 123 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RBX1 1 106 - -
Dod03g2236 123 MobiDBLite consensus disorder prediction 1 28 - -
Dod03g2236 123 SUPERFAMILY RING/U-box 28 84 - -
Dod03g2236 123 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 17 85 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2236 Dod-Chr3 52446726 52450923 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2236 K03868 - gmx:100789570 174.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1370 10 33878154 33880423 Dod03g2236 03 52446726 52450923 PCT