Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2218 ATGTTCCAACGAAGAAAAAAAGAACCTGGTACACTGCCCCTCTCAAACTCAAACTCAAACTCAGAATCAGACACAAAATCAGAATCATTCCCAATGCCTCCTCCACCTTGTTGTTCCACCACCTTCCTCAGAAACCCAACAACGTTCTCGCTCTTAATTCTCTTCTTCTTCTCTCTCTTCCTCAACTTCTACCTCCTCTTCACCCTCTGGTCCCCAATCCCCACGCCCTTCGCATCCACCTCCCCCACCACGCGCTTCGCCTCCACCACCACGCGCCGCCACATTGTCTTCACGATCGCGTCCTCTTCCTTGTCCTGGCCCCGCCGCCACCACTACCTCCGCCTCTGGTACTCACCCAACACCACGCGCGCAATCGCGTTCCTCGACTCACAAGTTCCCAGCGCCAACGCTGATTCTTCCTCTTCTTCTTTGCTGCCGCCGGTGGTTATCTCCGGCAAGACGTCCGAATTTCCGTACACTTTCCGGGGAGGGCTCCGGTCGGCGATCAGGGTGGCGCGTGCGGTGAAGGAGGCCGTCGATCGGAACGAGTCGGATGTGAGGTGGTTCGTGTTCGGCGACGACGACACCGTTTTCTTCGTGGATAACGTTGTTAGCGTCTTGTCGAAGTATGATCACGATAGGTGGTTCTATGTTGGGGCCAATTCGGAGAGCTACGACCAGAACGTGAAGTACTCGTTCGAGATGGCGTTTGGCGGTGGAGGTTTTGCGGTGAGTCACGCGCTGGGGAAGGTTCTGGCGAGGGTTTTGGACTCTTGCTTGATGAGGTATGGGCACTTGTATGGGAGTGATGCTAGGATTTTCGCTTGTGTTGCTGAGCTTGGTGTTGGGTTAACCCATGAACCTGGGTTTCATCAGTTAGATATGCGGGGCAATTTGTTTGGGATGCTGGCTGCACATCCACTATCTCCTCTGCTGTCCCTTCATCACTTGGATGCGGTGGATCCTCTCTTTCCTAACATGGACAGAGCACAAGCCTTGGAACATCTTATTGCAGCTGCAACCATAGATCCTGCCAGGATTTTGCAGCAAACTGTCTGTTATGATCAATCGAATTCTTTGACTTTCTCAGTTTCCTGGGGTTTCGCCGTTCAAATCTTTGAAGGAAATAAATTTCTTTCGGATCTCCTTTCGCGGGAGAGGACTTTTGTTCCATGGAAGAGGGGTAGTAGAGTTGAAGCCAAGTTTATGTTTAACACGAGAGACTATCCTAAAGATCCTTGTCAAAGGCCTTATGTCTTTTTCTTGAAGAGTGTTACATCTGATGAAAGGGGCATTTGGAGCTATTACACCAGGCATGTTTTTGGGAACTGTGTGGAATCAAATTCTGTAAAAAAGCTGAGGCAGATCTTAATTTTTTCAAGGAAGCTAGAGCTTAGCGTAGAAGAGTTGAAAGCCCCCCGTCGTCAGTGCTGCGATTTTTCCCCATCTTCCAATGAATCAATCCGTATTAACATTAGACAGTGTGGAATCGATGAACTGATCTCCATGCACCAATAG 1518 0.5 MFQRRKKEPGTLPLSNSNSNSESDTKSESFPMPPPPCCSTTFLRNPTTFSLLILFFFSLFLNFYLLFTLWSPIPTPFASTSPTTRFASTTTRRHIVFTIASSSLSWPRRHHYLRLWYSPNTTRAIAFLDSQVPSANADSSSSSLLPPVVISGKTSEFPYTFRGGLRSAIRVARAVKEAVDRNESDVRWFVFGDDDTVFFVDNVVSVLSKYDHDRWFYVGANSESYDQNVKYSFEMAFGGGGFAVSHALGKVLARVLDSCLMRYGHLYGSDARIFACVAELGVGLTHEPGFHQLDMRGNLFGMLAAHPLSPLLSLHHLDAVDPLFPNMDRAQALEHLIAAATIDPARILQQTVCYDQSNSLTFSVSWGFAVQIFEGNKFLSDLLSRERTFVPWKRGSRVEAKFMFNTRDYPKDPCQRPYVFFLKSVTSDERGIWSYYTRHVFGNCVESNSVKKLRQILIFSRKLELSVEELKAPRRQCCDFSPSSNESIRINIRQCGIDELISMHQ* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2218 505 Gene3D - 82 316 - -
Dod03g2218 505 MobiDBLite consensus disorder prediction 10 28 - -
Dod03g2218 505 Pfam Protein of unknown function, DUF604 227 478 IPR006740 -
Dod03g2218 505 PANTHER FRINGE-RELATED 53 503 - -
Dod03g2218 505 PANTHER GLYCOSYLTRANSFERASE 53 503 - -
Dod03g2218 505 MobiDBLite consensus disorder prediction 1 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2218 Dod-Chr3 52170501 52174549 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2218 89 504 Glycosyltransferase AT4G15240 63.549 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2218 - - aip:107629947 678.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2218 03 52170501 52174549 Dod03g2218 03 52170501 52174549 ECH
Dod03g2218 03 52170501 52174549 Dod10g1354 10 33715371 33717807 PCT