Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2213 ATGAATCCCCTGATTCTCAATTCATCCTTGTTTCCTCTTAACAGCTTTAGCAAACATGAGAAACTAGCTAATATCATGCGTAGATATAGTTTTCCCTTCCAATGCTTAGCAACCCAAAACGTTCCTCAAAGAAACTCTGCTAATTACCAGCCAAATGTCTGGAGTTACGATTTTCTGCAGTCCTTGAAGCATGATTATGCGGCAATTGCTCCTAGTTTCATACTCTACATATATGGTGCTTTAGATGTGATGCATGAGGACAGGGCTAAGAAGCTACGAGAGGAAGTTAGGAGAATGATCAAGCATGACAATGAAGATATATGGAACACTTTGAAGTTGATTGACCATGTCAAACGCTTGGGGCTCCGCTACCACTTTGACATGGAGATAGCACAAGCCCTTGATAGTTACGAAGGAGAAGAGATTCTGGATGAGGCCAAGGCCTTCAGTAGCTTGCACCTTAGGAACTCACTTGATAACAATAATGAAGATAGAAGCAGTGTCTTCTTGGAACAAGTGAGTCACGCATTGGAGCTTCCATTGCGTCGTAGAATCCAAAGGCTTGAAGCCCGATGGTACATTGAGGCGGATGAAAAAACAAAGGACCCAAATTGGGTGCTGCTTGAAGTGGCCAAGCTGGATTTCAACATAGTGCAGTCAACGCTCCAAAAGGATCTCCAACAAGTTTCAAGCTGGTGGAAAGGAATGGGACTAGCTGCAGAGTTAAGCTTCAGCAGAGACAGGCTAATGGAGTGTTTCTTTTGGACCGTGGGAATGGCCTTCGAGCCTCGGTTCAGTGATGTCCGCAAAGGTTTAACCAAAGTTACTTGTCTAATAACTATAATTGATGACATCTATGATATTTATGGCACCTTCGATGAACTAGAGCTTTTCACCGCAGCTGTTGATAGTTGGGATATCAAAGCAATTCAAATTCTTCCAGAGTACATGAAGATATGCTTCCTAGCTCTCTACAACACTATAAACGAATTCGCTTATCATCACACACTCAAAGAGCAAGGACATGATATTCTTCCCTACCTCACCAAAGCATGGTCAGATCTGCTGAAAGCATTCCTACAAGAAGCCAAATGGTGCCGAGACGACAAGCATGTTCCTACATTTGAAGAATACCTCAACAATGGGTGGTTGTCAGTGTCTGGTGTGGTTATACTGATCCATGCATATTTCTTGTTGACTCACAACATCACAAAGGAGGCACTGGATGCCTTGCACAATTACCATGATCTGTTGCGCATGCCATCCATTATTTTTCGACTTTGCAATGATTTGGGCACTTCCACGGCCGAGTTACAGAGAGGTGAAGCAGCGAGCTCAATTATGTGCTACATGCATGAAGGAGGTGTCAGTGAGGAGGATGCTAGCAAACACATCTGTGGTTTGGTTGATGACACTTGGAATAAGATGAACAAAGGTTAG 1440 0.4333 MNPLILNSSLFPLNSFSKHEKLANIMRRYSFPFQCLATQNVPQRNSANYQPNVWSYDFLQSLKHDYAAIAPSFILYIYGALDVMHEDRAKKLREEVRRMIKHDNEDIWNTLKLIDHVKRLGLRYHFDMEIAQALDSYEGEEILDEAKAFSSLHLRNSLDNNNEDRSSVFLEQVSHALELPLRRRIQRLEARWYIEADEKTKDPNWVLLEVAKLDFNIVQSTLQKDLQQVSSWWKGMGLAAELSFSRDRLMECFFWTVGMAFEPRFSDVRKGLTKVTCLITIIDDIYDIYGTFDELELFTAAVDSWDIKAIQILPEYMKICFLALYNTINEFAYHHTLKEQGHDILPYLTKAWSDLLKAFLQEAKWCRDDKHVPTFEEYLNNGWLSVSGVVILIHAYFLLTHNITKEALDALHNYHDLLRMPSIIFRLCNDLGTSTAELQRGEAASSIMCYMHEGGVSEEDASKHICGLVDDTWNKMNKG* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2213 479 Gene3D - 137 203 IPR036965 GO:0010333|GO:0016829
Dod03g2213 479 SUPERFAMILY Terpenoid synthases 204 478 IPR008949 -
Dod03g2213 479 PANTHER TERPENE SYNTHASE 12-RELATED 137 478 - -
Dod03g2213 479 PANTHER TERPENE SYNTHASE 12-RELATED 38 136 - -
Dod03g2213 479 SFLD Terpene Cyclase Like 1 C Terminal Domain 204 478 IPR034741 -
Dod03g2213 479 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 50 199 IPR008930 -
Dod03g2213 479 PANTHER OS04G0344100 PROTEIN-RELATED 137 478 - -
Dod03g2213 479 PANTHER OS04G0344100 PROTEIN-RELATED 38 136 - -
Dod03g2213 479 CDD Terpene_cyclase_plant_C1 44 478 IPR044814 GO:0010333|GO:0016102
Dod03g2213 479 Pfam Terpene synthase family, metal binding domain 208 474 IPR005630 GO:0000287|GO:0010333|GO:0016829
Dod03g2213 479 Pfam Terpene synthase, N-terminal domain 54 136 IPR001906 GO:0010333|GO:0016829
Dod03g2213 479 Gene3D Farnesyl Diphosphate Synthase 204 478 IPR008949 -
Dod03g2213 479 Gene3D - 54 136 IPR036965 GO:0010333|GO:0016829
Dod03g2213 479 SFLD Isoprenoid Synthase Type I 204 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2213 Dod-Chr3 52045252 52055810 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2213 K12742 K19968 gmx:100782452 514.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2213 03 52045252 52055810 Dod03g2213 03 52045252 52055810 ECH
Dod10g1338 10 33520343 33523130 Dod03g2213 03 52045252 52055810 PCT