Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2211 ATGGAAGCTTACTGCAACCTTGAAGTGGATGTAAATGGAGAAGAGACCTTCATGGTGGACAAGGCTATTATTGCTCAGTACTCAGGCAAATTTGCTAAATTATTTGGAAAATCAAGTGGTGCCGCTGGAAGGCTTAAAGTAATATTCCATGATTTTCCAGGAGGTGCAGAAGGTTTTGAGCTTATGTTAAGATTTTGTTACAACAATGGAACAATTGACATGAATCCTTCCAATTTGTCACAAGCACGTTGTGCTGCTGAGTACATGGAAATGAAGGAACCTGTTGCTGGTGTTTCTAATTTATTGGAACAAACAGAGAAATCACTCCAAGAGATCAGCTATTGGACATGGTCAGAACTTTTGATTGCTTTGAAGCAGTGCCAGAACTTGTCCTTAGTTGCAGATTCTTCTGTGATGCTAGAAAAATGCTTGGATAGTGTAGTGGGGAGGATGGTTCTGTCTAGTGAAGCAAGTCCATGTCCATCAACATGTTCCACTGACAGTTCCGGAATTCGGTTTTCATGTGACTCTAAAAGCACTGAGAGTATAAAGACTAATTTCTCTCGTGCAACATGGTGGTTTGAGGATCTCCTATTTTTGAGTCCATTGTTGGTTGGAATGTTGGTGAGGTCAATGCTCTCAAGAAAGTTGGACCATGCTGTTATCAGCAGGTTTCTGATGTATTATCAGAAGTCAAGATTTTCCACTGCTAGTACTACCATTGAGAAGTACAAGATCTTAGAAATGGTCATAGATATGCATTACAATATGGACCACAGCACCATTTCTTGCAAGACTTTGTTTGGAATTCTAAGGGTTACTTTGAGTTTGAACATAAGCAAGTCTTACAGTAACAAGTTGGAGACTATGATTGGTTCCCAGTTGGATCAAGCAACCTTGGACAATCTGCTTGTTCCATCTCCCTATGGAATAAGCTACTTGTATGATGTGAACCTTGTTCTGAGGTTTCTGAAAGCGTTCCTGCATCGAGGAACAGGTCTAGTCACTCCCATTCGGATGAGGAAAGTTGCAAGCTTAATAGATTTGTATATAGCAGAAATAGCCCCTGATCCTTGTCTAAGACCTTCCAAGTTCTTGGCTCTTGCCACATCACTTCCAGATTCTGCAAGAGATTCTTGTGATGAGCTCTACCATGCAATGGACATGTACCTCGAGGTACATGCTCAATTGTCACAAGAAGAAAGGGTGAAGATATGCTGTGCCTTAAATTATGAAAAGCTTTCCCCTCAAGCTTGCCTAAACCTTTCTCAGAACCCCAAATTCCCTTCAAAATCAGCAGTTCAGGCTCTCATTTCTCAACAACCAAAGCTCAAAAATTTACTCCAAGTTACTCCCTGCACAACTCCAATCAGTGATTCACCTTGCAGTTCAAGTGGTGCTGCTCAAAAGGGAAAAGAGAAAAGCAGTGAGCAGGTTGTGTTGTATGCTGGCAACTTTGACCTTTCAGCTGATAATGAGAAACTCAGGGCACATTTGCAAGGAATGCAGTGGAGGGTAATGGAACTGGAGAAAATCTGTAGGAAAATGCAAACCCAGATGGCAAAGATCACAAAATCGAAAGTATCAGCCAATAGTCATGCAAGATCTTTGCCCAAGCTCTGTTCATGA 1629 0.4138 MEAYCNLEVDVNGEETFMVDKAIIAQYSGKFAKLFGKSSGAAGRLKVIFHDFPGGAEGFELMLRFCYNNGTIDMNPSNLSQARCAAEYMEMKEPVAGVSNLLEQTEKSLQEISYWTWSELLIALKQCQNLSLVADSSVMLEKCLDSVVGRMVLSSEASPCPSTCSTDSSGIRFSCDSKSTESIKTNFSRATWWFEDLLFLSPLLVGMLVRSMLSRKLDHAVISRFLMYYQKSRFSTASTTIEKYKILEMVIDMHYNMDHSTISCKTLFGILRVTLSLNISKSYSNKLETMIGSQLDQATLDNLLVPSPYGISYLYDVNLVLRFLKAFLHRGTGLVTPIRMRKVASLIDLYIAEIAPDPCLRPSKFLALATSLPDSARDSCDELYHAMDMYLEVHAQLSQEERVKICCALNYEKLSPQACLNLSQNPKFPSKSAVQALISQQPKLKNLLQVTPCTTPISDSPCSSSGAAQKGKEKSSEQVVLYAGNFDLSADNEKLRAHLQGMQWRVMELEKICRKMQTQMAKITKSKVSANSHARSLPKLCS* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2211 542 ProSiteProfiles NPH3 domain profile. 191 443 IPR027356 -
Dod03g2211 542 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 11 542 - -
Dod03g2211 542 Pfam NPH3 family 191 419 IPR027356 -
Dod03g2211 542 Pfam BTB/POZ domain 3 104 IPR000210 GO:0005515
Dod03g2211 542 PANTHER OS12G0117600 PROTEIN 11 542 IPR043454 -
Dod03g2211 542 SUPERFAMILY POZ domain 3 102 IPR011333 -
Dod03g2211 542 Gene3D Potassium Channel Kv1.1; Chain A 1 121 IPR011333 -
Dod03g2211 542 ProSiteProfiles BTB domain profile. 5 69 IPR000210 GO:0005515
Dod03g2211 542 SMART BTB_4 5 106 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2211 Dod-Chr3 51951736 51955385 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2211 17 522 EF-hand Containing Proteins AT3G44820 27.061 2.87e-56 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2211 - - gmx:100784792 880.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2211 03 51951736 51955385 Dod03g2211 03 51951736 51955385 ECH