Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2201 ATGGTTGATGTGTGGTGGGGGATCATAGAACTGAAGGGTCCTAAGCAGTATGATTGGAGTGCTTATAGGAGCTTGTTTCAACTTGTTAAGGAATGTGGCTTGAAACTGCAAGCCATCATGTCGTTCCACCAATGTGGAGGGAATGTTGGAGATGTTGTTTACATCCCAATTCCTCAATGGGTCCTTGACACTGGAGAATCAAATCCTGATATCTTCTACACCAATCGTTCTGGTAACAGGAACAAGGAATATCTTACTATTGGTGTAGATAACGAGCCCATCTTCCATGGACGAACAGCCATTGAGATATACCGTGACTTCATGAGGAGTTTCAGGGAAAACATGTCAGATTTTTTAGAATCTGAGGTTATTAATGACATTGAAGTTGGGCTTGGCCCAGCAGGAGAGCTCAGAACCCCCTCTTATCCACAAAGTCAAGGATGGGAATTTCCTGGTATTGGGGAGTTTCAGTGCTATGACAAATATTTGAAGGCAGATTTTAAAGTTGCTGCAGCAAAGGCTGGCCATCCTGAATGGGAACTGCCAGATGATGCAGGGGAGTACAATGATGTACCAGAATCAACAGGGTTCTTCAAATCAAATGGCACATACCTCACTGAGAGAGGGAAGTTCTTCTTAACTTGGTATTCTAATAAATTGCTGATTCATGGTGATCAAGTACTAGAAGAAGCCAACAAAGCTTTCCTGGGCTGTAAAGTCAAATTAGCAATTAAAGTCTCTGGAATCCACTGGTGGTACAAATCTGAAAGTCATGCTGCCGAGCTCACTGCCGGATATTACAACCTTGATGATAGAGATGGATACCGTCCTATCGCAAGAATGTTGTCTCGCTATCATGCCATTTTGAACTTTACATGTCTTGAGATGAGGGACTCAGAACAAAGCTCTGATGCCAAAAGTGGACCTGAGGAACTTGTTCAGCAAGTATTGAGTGGAGGTTGGAGAGAAAAACTTGAAGTTGCCGGAGAAAATGCGCTTCCAAGGTATGATGCCACAGCTTACAACCAAATCATATTGAATGCTAGACCAAATGGCGTCAACAAAAATGGCCCTCCAAAACTAAGGATGTACGGAGTAACATACCTTCGGCTATCAGATGACTTGCTGCAACAATCAAATTTTGATTTATTCAAAAAATTTGTGCTAAGGATGCATGCAGATCAGGATCACTGTGAAGATCCTCAGAAGTACAATCATGTCATAACTCCATTGCAACCACCAGGACCGAAAATTCCCCTTCAGGAAATTCTTGAAGCAACCAAACCAATACCACCGTTCCCCTGGGATTCAGAGACAGACATGAAAGTTGATGATTTAATTCCCAGCCCCGATGTGAAGGATGATTAA 1368 0.4269 MVDVWWGIIELKGPKQYDWSAYRSLFQLVKECGLKLQAIMSFHQCGGNVGDVVYIPIPQWVLDTGESNPDIFYTNRSGNRNKEYLTIGVDNEPIFHGRTAIEIYRDFMRSFRENMSDFLESEVINDIEVGLGPAGELRTPSYPQSQGWEFPGIGEFQCYDKYLKADFKVAAAKAGHPEWELPDDAGEYNDVPESTGFFKSNGTYLTERGKFFLTWYSNKLLIHGDQVLEEANKAFLGCKVKLAIKVSGIHWWYKSESHAAELTAGYYNLDDRDGYRPIARMLSRYHAILNFTCLEMRDSEQSSDAKSGPEELVQQVLSGGWREKLEVAGENALPRYDATAYNQIILNARPNGVNKNGPPKLRMYGVTYLRLSDDLLQQSNFDLFKKFVLRMHADQDHCEDPQKYNHVITPLQPPGPKIPLQEILEATKPIPPFPWDSETDMKVDDLIPSPDVKDD* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2201 455 PRINTS Plant beta-amylase signature 122 131 IPR001371 GO:0000272|GO:0016161
Dod03g2201 455 PRINTS Plant beta-amylase signature 334 343 IPR001371 GO:0000272|GO:0016161
Dod03g2201 455 PRINTS Plant beta-amylase signature 382 396 IPR001371 GO:0000272|GO:0016161
Dod03g2201 455 PRINTS Plant beta-amylase signature 278 288 IPR001371 GO:0000272|GO:0016161
Dod03g2201 455 PRINTS Plant beta-amylase signature 349 365 IPR001371 GO:0000272|GO:0016161
Dod03g2201 455 PRINTS Plant beta-amylase signature 367 381 IPR001371 GO:0000272|GO:0016161
Dod03g2201 455 PRINTS Plant beta-amylase signature 320 329 IPR001371 GO:0000272|GO:0016161
Dod03g2201 455 Gene3D Glycosidases 1 445 - -
Dod03g2201 455 MobiDBLite consensus disorder prediction 438 455 - -
Dod03g2201 455 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 204 223 IPR001554 GO:0000272|GO:0016161
Dod03g2201 455 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 312 334 IPR001554 GO:0000272|GO:0016161
Dod03g2201 455 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 17 35 IPR001554 GO:0000272|GO:0016161
Dod03g2201 455 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 257 268 IPR001554 GO:0000272|GO:0016161
Dod03g2201 455 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 132 154 IPR001554 GO:0000272|GO:0016161
Dod03g2201 455 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 275 298 IPR001554 GO:0000272|GO:0016161
Dod03g2201 455 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 39 60 IPR001554 GO:0000272|GO:0016161
Dod03g2201 455 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 240 256 IPR001554 GO:0000272|GO:0016161
Dod03g2201 455 MobiDBLite consensus disorder prediction 428 455 - -
Dod03g2201 455 ProSitePatterns Beta-amylase active site 1. 43 51 IPR018238 GO:0000272|GO:0016161
Dod03g2201 455 PANTHER BETA-AMYLASE 6 1 443 - -
Dod03g2201 455 SUPERFAMILY (Trans)glycosidases 1 440 IPR017853 -
Dod03g2201 455 Pfam Glycosyl hydrolase family 14 1 387 IPR001554 GO:0000272|GO:0016161
Dod03g2201 455 PANTHER - 1 443 IPR001554 GO:0000272|GO:0016161
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2201 Dod-Chr3 51788272 51791630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2201 1 444 Glycoside Hydrolase AT4G15210 70.495 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2201 K01177 - gmx:100787580 832.017