Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2196 ATGCCAGAGGCTCCAATTACCCACTACCTTTGCAACAAGCCAAGCAACGAGCTTGTTCACGATGATAGTAATAATACTCACATGGTGGTGGAGGACAAGAATAAGAAAGCACTGAAATACATCGAGGATGTTACAAGCAACCCTGGTGAAATTCAGCAAAGGGTCCTTGCCGAGATCCTTTCATCTAGTGCCCATGCTGAGTACCTGCAGCGGCATGGCCTAGATGGGCACACTGACGGGGACACTTTCAAGAAGGTCATGCCTGTGGTCACTTACGAGGATCTAAAGCCAGATATTGATCGTATAGCTAATGGTGATACCTCCCCAATTTTATGTTACAAACCCATCTCGGAGTTCCTCACTAGCTCTGGAACATCTGGTGGGGAGAGAAAACTGATGCCAACAATTGAAGAGGAGCTACAGAGGAAGTCATTGCTTTACAGCCTTTTGATGCCAGTGATGGATCAATTTGTGCCCGGTTTGGACAAAGGCAAAGGAATGTACTTTCTGTTCATAAAATCAGAAGCCAAGACTCCTGGTGGTCTCCTTGCTCGTCCAGTTCTAACAAGCTACTACAAGAGCTCACATTTTAAGGACCGGTCACATGATGGACATGACCCTTACACAAACTACACTAGCCCCAATGAGACCATTCTCTGCCTGGACTCTTACCAGAGCATGTACTCTCAATTGCTTTGTGGCCTTTGCCAAAATGAGGAAGTCCTTCGTGTTGGTGCTGTTTTTGCTTCTGGTTTCATCCGTGCCATCAAGTTCCTTGAAAAACATTGGGTTGATTTGTGTAATGACATAAGAACAGGTAACATAGACCCCAAAATCACTGACACATCTGTGAGAGATGTTGTCCTGAAAATACTCAAGAAACCAAACCCAAAGCTTGCAAGTTTTATAGAAGGTGAATGCATGAAGGGGTCATGGAAAGGGATCATTACTAGGTTGTGGCCCAACACAAAGTATGTTGATGTTATTGTCACAGGGACCATGTCTCAGTACATTCCAATATTGGATTACTATAGCAATGGTCTCCCTCTTGTCTGCACCATGTATGCTTCTTCTGAGTGTTATTTTGGCCTCAATTTAGACCCTTTGTGTCAGCCAAGTGAGGTGTCTTACACCCTCATTCCCACCATGGCCTACTTTGAGTTCTTGCCTCTCAACAAGAATATGCATGGGCATGCCAATTCAAATTCTCAGCCAGAGCAAGAACAGCTAGTTGATCTTGTAGATGTAGAGTTGGGTCAAGAATATGAGCTTGTAGTCACCACTTATGCAGGACTTTATAGGTACCGGGTTGGTGACATACTCCGTGTAGCAGGGTTCAAGAACAAGGCTCCTCAATTCAACTTTGTGTGCAGAAAGAACGTGGTTCTGAGCATTGACTCCGACAAAACCGATGAAGTTGAGCTTCAAAATGCTGTCAAGAACGGAGCCAACCATCTCTTACAGTTCGGTGCATCACTCACAGAATACACAAGCTGTGTGGACACGTCCACTATCCCAGGCCACTACGTCCTATACTGGGAGATCAGCGTGCAACAACAACAAGAAGGGAAAACCCCAGCAATTATGATCCCTTCTTCTGCCTTTGAGGAATGTTGCCATGCAGTTGAAGAGTCCCTCAACAGTGTGTATCGCCAAGGAAGGGTGTCAGAGTCTATTGGGCCATTGGAGATCAAGGTTGTGGAGAATGGAACATTTGACAAGCTCATGGACTTTGCACTCAGCCAAGGTGCATCCATAAACCAATACAAGACACCTCGGTGTGTGAAATTTGCTCCCATTTTGGAGCTCCTAAACTCCAAGGTAGTTTCCAGTTACTTCAGTCAAAAATGCCCAAAGTGGGTTCCTGGTCACAAGAGGTGGTGCAACCTTGACTGA 1896 0.4541 MPEAPITHYLCNKPSNELVHDDSNNTHMVVEDKNKKALKYIEDVTSNPGEIQQRVLAEILSSSAHAEYLQRHGLDGHTDGDTFKKVMPVVTYEDLKPDIDRIANGDTSPILCYKPISEFLTSSGTSGGERKLMPTIEEELQRKSLLYSLLMPVMDQFVPGLDKGKGMYFLFIKSEAKTPGGLLARPVLTSYYKSSHFKDRSHDGHDPYTNYTSPNETILCLDSYQSMYSQLLCGLCQNEEVLRVGAVFASGFIRAIKFLEKHWVDLCNDIRTGNIDPKITDTSVRDVVLKILKKPNPKLASFIEGECMKGSWKGIITRLWPNTKYVDVIVTGTMSQYIPILDYYSNGLPLVCTMYASSECYFGLNLDPLCQPSEVSYTLIPTMAYFEFLPLNKNMHGHANSNSQPEQEQLVDLVDVELGQEYELVVTTYAGLYRYRVGDILRVAGFKNKAPQFNFVCRKNVVLSIDSDKTDEVELQNAVKNGANHLLQFGASLTEYTSCVDTSTIPGHYVLYWEISVQQQQEGKTPAIMIPSSAFEECCHAVEESLNSVYRQGRVSESIGPLEIKVVENGTFDKLMDFALSQGASINQYKTPRCVKFAPILELLNSKVVSSYFSQKCPKWVPGHKRWCNLD* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2196 631 Pfam GH3 auxin-responsive promoter 41 596 IPR004993 -
Dod03g2196 631 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 26 627 - -
Dod03g2196 631 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 26 627 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2196 Dod-Chr3 51652617 51656026 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2196 30 614 EF-hand Containing Proteins AT1G23160 49.915 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2196 K14487 - gmx:100819676 1061.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2196 03 51652617 51656026 Dod03g2196 03 51652617 51656026 ECH