Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2195 ATGGCTGGTATTGGCAATGGAGTTGCATTTGAAGACTTGCTGCCCGTGATGGCCAACAAGCTAGGAGGTGAGGGTCTCATAAAGGAACTGTGCAATGGGTTCCAGTTGCTGATGGACAAGGAAAAGGGTGTGATCACTTTGGAGAGCTTAAGAAGAAACGCTGCTGTTTTGGGGTTGCAGGACTTGAAGGAGGATGAGCTTGTGAGCATGATGAGGGAAGGGGACCTTGATGGAGATGGGGCACTCACCCAGATGGAGTTCTGTGTCTTGATGTTCAGGTTGAGCCCTGAGTTGATGGAAGAGTCTTGGGTCTGGATTGAAGAGGCACTGCAACATGAACTAAGAAACTCTTCCATTTAG 360 0.4889 MAGIGNGVAFEDLLPVMANKLGGEGLIKELCNGFQLLMDKEKGVITLESLRRNAAVLGLQDLKEDELVSMMREGDLDGDGALTQMEFCVLMFRLSPELMEESWVWIEEALQHELRNSSI* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2195 119 Gene3D - 8 119 - -
Dod03g2195 119 ProSiteProfiles EF-hand calcium-binding domain profile. 62 97 IPR002048 GO:0005509
Dod03g2195 119 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 1 116 - -
Dod03g2195 119 PANTHER CALCIUM-BINDING PROTEIN KIC 1 116 IPR044205 GO:0005509
Dod03g2195 119 SMART efh_1 66 94 IPR002048 GO:0005509
Dod03g2195 119 ProSitePatterns EF-hand calcium-binding domain. 75 87 IPR018247 -
Dod03g2195 119 SUPERFAMILY EF-hand 25 103 IPR011992 -
Dod03g2195 119 Pfam EF-hand domain pair 41 93 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2195 Dod-Chr3 51603529 51604792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2195 10 114 EF-hand Containing Proteins AT4G27280 66.981 7.33e-46 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2195 K24345 - gmx:100527206 209.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2195 03 51603529 51604792 Dod03g2195 03 51603529 51604792 ECH