Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2192 ATGTTTAGGTTTTCTTGTTTCCAAGCTCATGTTCAAAGCAACAAAACAAAGAAAATTGTTGAACCTTCTGCTCAAGCGATGGTAATGGCACTGCAAGATGGTTCCCGAAATGAAGTCTCCAAGGATTCATCTGTCCTGACAAGATCAAATCCATCAATTTCGAAAGCACAAGTAGATGAAACAATGAATGGCACTGAAATTCACAGCAATGGGGATTCGGTTGAGCACATTTGTAGGTCAGAGGATCTGAACAGCAAATGCTCGTTTGAGTCTGAGAGAGATGTTCACCGACCCATGCACCTTAAGAAAAGCCAGTCTCTTGAAAGTGGACTTTACAAAGAAGGCATGCTGCTTTCGAATTGCAGAAAGGAGCATGATGCAAACTACGCTGGTCAGTGTGAAAAAAGTCCGAACTCTAAGTTTCAAGTCAGTCCAGGTCTTGCAAATGTTGGCTCAATTTTTTCAATAGGAGACCGAACTCCTTCAGATAAAGATGCCTATGATATTGCTGATACTCCATTGTCTAGTGAATTAGCTGGTGTTTTTGCTGATCGCTCTTCTCGTCCTGGTTCCCCATTTTTAAAGAAGTCGCATTCTCTACCCAATATCAAAGATTCTGAACTTCCTTCTGGAGAACATGCTTTTAAACGTGCATCTTCAATATCAAGATCTTCTGATGATCTTCAGGCTTTAGGTACAAGGCAGATAGAGGAATTTGTCAATGAGGCTGATGATCAAATAAGGGGAGATCGAGAAAGAGAGAATGCCATGGGAAAAATTGAAGAGAGTCATATGGATAGTTACTTTGGTGATGGTTTTGATTCATATTTGCTTTCTGGTTTAGATATAAGTGAAGTCAAGACCTTTCAGCAACATCCCTCAGTTGACTGCTTGGCTGAATTTCCTAACAAAGATTTTAAGATCAAACGCATTGAGGATTGGGTTATGGGTCTGGAGCATTGTGAACCACCTCCAGGAGAAGCAAATGCAGTGCCTGAACCTATTGATCCCTTGGTCGAAGCTAACACCATAAATGGGGTAACTGCCATCGGTGCAGATCATAAGGTCACTCCAGGAATGGATGCTGCTAAAAGATATATATCTTCTCTGAGTGCTAATGCCAGTGCTGCTCAGCTGGCAAATCATGGGTTGGTTGTGATCCCTTTTCTGAGTGCATTTGTCAGTATGAAGGTGCTCCATTTGGCTGGAAATTCTATCGTGAGGATAACTGCAGGTGCTCTTCCTCGAGGGCTTCACGTTCTGAATTTGTCAAGAAACAACATCTCTACTATAGAGGGATTGCGAGAACTTACACGACTTCGTGCCCTAGACCTCAGCTACAACCGTATATTAAGAATTGGACATGGCCTTGCGTCTTGTTCATCTCTGAAGGAGCTGTACCTTGCCGGGAACAAGATCAGCGAAGTGGAGGGTCTGCACCGCCTCTTGAAACTAACTATCCTGGATCTCCGTTTTAACAAAATTTCAACGGCCAAGTGTCTAGGCCAACTTGCAGCCAACTATAATTCATTGCAAGCTATCAGCTTGGAAGGGAACCCATCCCAGAAAAATGTTGGGGATGAACAACTGAAGAAATATCTGCAAGGCCTTCTTCCCCATCTTGTCTACTACAACAGGCAGCCTATCAAAGTGAGCACACTGAAGGATGGTGCGGACCGTTCGGTTCGGCTAGGCATGATTTCCTATCAGTCTGACCGCAGCCTTAGATCAGATCGCAAGACTCCAAGGAAGGGCAGCCATGGTGCCGTAGCTGTTCGGAAGCCATCAACCTCTTCCACTCATGCTCGCAGAATTCAAGCAGTGGACTTGCCGAAACTGTCCAGAGGCAAGCAAGGCTGCCTGCCACCGATCGGAACCAAAGTGCCAAGCCAAAGTCGCCATCATCTCGATTCTCCCAGCAAAGCATCAGTCTTGACTTCCCAGCGTTCCATTCCCAAGAGTCGCAGTGAGGGGACTCTTGGAGCTTTCTGA 1992 0.4493 MFRFSCFQAHVQSNKTKKIVEPSAQAMVMALQDGSRNEVSKDSSVLTRSNPSISKAQVDETMNGTEIHSNGDSVEHICRSEDLNSKCSFESERDVHRPMHLKKSQSLESGLYKEGMLLSNCRKEHDANYAGQCEKSPNSKFQVSPGLANVGSIFSIGDRTPSDKDAYDIADTPLSSELAGVFADRSSRPGSPFLKKSHSLPNIKDSELPSGEHAFKRASSISRSSDDLQALGTRQIEEFVNEADDQIRGDRERENAMGKIEESHMDSYFGDGFDSYLLSGLDISEVKTFQQHPSVDCLAEFPNKDFKIKRIEDWVMGLEHCEPPPGEANAVPEPIDPLVEANTINGVTAIGADHKVTPGMDAAKRYISSLSANASAAQLANHGLVVIPFLSAFVSMKVLHLAGNSIVRITAGALPRGLHVLNLSRNNISTIEGLRELTRLRALDLSYNRILRIGHGLASCSSLKELYLAGNKISEVEGLHRLLKLTILDLRFNKISTAKCLGQLAANYNSLQAISLEGNPSQKNVGDEQLKKYLQGLLPHLVYYNRQPIKVSTLKDGADRSVRLGMISYQSDRSLRSDRKTPRKGSHGAVAVRKPSTSSTHARRIQAVDLPKLSRGKQGCLPPIGTKVPSQSRHHLDSPSKASVLTSQRSIPKSRSEGTLGAF* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2192 663 PANTHER BNAA09G01440D PROTEIN 6 662 - -
Dod03g2192 663 Pfam Leucine Rich repeat 484 496 IPR001611 GO:0005515
Dod03g2192 663 ProSiteProfiles Leucine-rich repeat profile. 417 438 IPR001611 GO:0005515
Dod03g2192 663 SMART LRR_typ_2 393 416 IPR003591 -
Dod03g2192 663 SMART LRR_typ_2 437 460 IPR003591 -
Dod03g2192 663 SMART LRR_typ_2 482 504 IPR003591 -
Dod03g2192 663 SUPERFAMILY Outer arm dynein light chain 1 387 549 - -
Dod03g2192 663 ProSiteProfiles Leucine-rich repeat profile. 462 483 IPR001611 GO:0005515
Dod03g2192 663 ProSiteProfiles Leucine-rich repeat profile. 439 461 IPR001611 GO:0005515
Dod03g2192 663 MobiDBLite consensus disorder prediction 631 655 - -
Dod03g2192 663 Pfam Leucine rich repeat 396 450 IPR001611 GO:0005515
Dod03g2192 663 Gene3D Ribonuclease Inhibitor 352 534 IPR032675 -
Dod03g2192 663 PANTHER NISCHARIN RELATED 6 662 - -
Dod03g2192 663 MobiDBLite consensus disorder prediction 572 663 - -
Dod03g2192 663 SMART LRR_sd22_2 415 436 - -
Dod03g2192 663 SMART LRR_sd22_2 460 481 - -
Dod03g2192 663 SMART LRR_sd22_2 482 506 - -
Dod03g2192 663 SMART LRR_sd22_2 437 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2192 Dod-Chr3 51548782 51553044 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2192 - - lang:109355198 870.537