Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2162 ATGAAGCAGATTGGTCAGACTAGCAGACGTGCATTAGCCACTGATGAGTGGCTAAGGGTGGAAGGATGTGACAACATCTATGCTCTAGGTGATTGTGCCACTGTTAACCAGCGGAGAGTTATGGAAGATATAGCCGTGATATTTAGCATGGCAGACAAGAACAATTCTGGAAGGTTAGATCTTAAAGAATTTCAAGGTGTGGTTGGTGACATTATTGAGAGGTACCCACAAGTGGAGATTTATTTAAAGAAGAACCAAATGAAAGACATGGCCACCTTGCTAAAGACCTCTCGAGAAAGCTCAGTTACAGTGGACATTGAATCTTTCAAGTCTGCTCTTTCCAAGGTAGATTCTCAGATGAAAAATCTTCCTGCAACAGCTCAGACTGCTTCAAGTCGCATGGAGTTGTGTGAGCAGTTTCCTGAAGGCCCTCTCAGGTTCAGGGGAACAGGACGCCATAGGTTTCATCCATTCAGGTACAAGCATTTGGGACAATTCGCTCCGCTAGGAGGAGAACAAACTGCAGCTCAGCTTCCAGGAGATTGGATTTCAATTGGCCAAAGCACCCAGTGGCTGTGGTATTCCGTATATATAAGGAATGCTGTGGGGGCGATTCTACCCTCTTATCCTGAAATACACAAACCGCGTGTGCCTTGCACCATGTATTGCTACAATTCAGGAGAATGA 687 0.4527 MKQIGQTSRRALATDEWLRVEGCDNIYALGDCATVNQRRVMEDIAVIFSMADKNNSGRLDLKEFQGVVGDIIERYPQVEIYLKKNQMKDMATLLKTSRESSVTVDIESFKSALSKVDSQMKNLPATAQTASSRMELCEQFPEGPLRFRGTGRHRFHPFRYKHLGQFAPLGGEQTAAQLPGDWISIGQSTQWLWYSVYIRNAVGAILPSYPEIHKPRVPCTMYCYNSGE* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2162 228 PANTHER NADH DEHYDROGENASE 1 202 IPR045024 GO:0003954|GO:0006116
Dod03g2162 228 ProSiteProfiles EF-hand calcium-binding domain profile. 39 74 IPR002048 GO:0005509
Dod03g2162 228 ProSitePatterns EF-hand calcium-binding domain. 52 64 IPR018247 -
Dod03g2162 228 Gene3D - 88 205 - -
Dod03g2162 228 SMART efh_1 43 71 IPR002048 GO:0005509
Dod03g2162 228 SUPERFAMILY EF-hand 11 121 IPR011992 -
Dod03g2162 228 Gene3D - 2 55 - -
Dod03g2162 228 PANTHER NAD(P)H DEHYDROGENASE B2 1 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2162 Dod-Chr3 50972455 50977047 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2162 1 202 EF-hand Containing Proteins AT2G20800 67.453 1.96e-102 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2162 K03885 - gmx:100790773 344.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2162 03 50972455 50977047 Dod03g2162 03 50972455 50977047 ECH