Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2161 ATGGATTTGACTCATCTAAATCTAAATACTGCAGGTATAGTGGCATATGCTGATGCCAGGCCAGTACAAAGTGAAAATGGTAATCAAAGCCCAAGAAAGAAAGTGGTGGTGCTTGGCACTGGCTGGGCTGCAACCAGTTTTCTGAAAAATATGAAAAGCTCCAATTATGACATCCACGTGGTTTCACCACGCAACTATTTTGCATTCACCCCTTTGTTACCAAGTGTCACATGTGGCACTGTGGAAGCACGGAGCATTGTTGAACCGATTCGCAGTATCACAAAGAAGAGTGGTGTAAATATTCAATTCAGTGAAGCTAAATGCTATAAGATCGATCCCAAGCACAAAAAAATTTATTGCCGTGCTGGTCATGACAAAAAGATGGGTGGCCTAGAAGATTTTTCCATTGATTATGATTACCTTGTAATAGCTATGGGAGCAAAATCTAATACCTTTAACACACCTGGTGTCGAGGAGCATGCTCATTTCTTGAAGGAAGTGGATGATGCTCTAAGAATCCGCCAAAAAGTGGTTGACCTTTTTGAAAGAGCAAGCCTCCCATCTTTACCTGTGGAAGAGAAGAAGAAACTTCTGAGTTTTGTAATTGTTGGTGGCGGTCCAACTGGGGTAGAGTTTTCTGCAGAGCTTCATGACTTTGTACATGAGGATCTATCTAAATTATACCCTTATCTTCAAGATTACGTCAAGATCACTCTCCTGGAGGCTGGTGATCATATCTTAAACATGTTTGACAAGAGAATTACAGAATTTGCTGAACAGAAGTTCCAAAGAGATGGCATTGATGTGAAGTTGGGATCTATGGTTGTCAAAGTGAGCGAAAAGGAAATCTCTGCCAAAGACAGAGGAACTGGCCAAGTTGTTTCTATACCTCACGGAATGGTAGTTTGGTCAACTGGTATTGGTCCTCGGCCATGA 936 0.4167 MDLTHLNLNTAGIVAYADARPVQSENGNQSPRKKVVVLGTGWAATSFLKNMKSSNYDIHVVSPRNYFAFTPLLPSVTCGTVEARSIVEPIRSITKKSGVNIQFSEAKCYKIDPKHKKIYCRAGHDKKMGGLEDFSIDYDYLVIAMGAKSNTFNTPGVEEHAHFLKEVDDALRIRQKVVDLFERASLPSLPVEEKKKLLSFVIVGGGPTGVEFSAELHDFVHEDLSKLYPYLQDYVKITLLEAGDHILNMFDKRITEFAEQKFQRDGIDVKLGSMVVKVSEKEISAKDRGTGQVVSIPHGMVVWSTGIGPRP* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2161 311 PANTHER - 22 311 - -
Dod03g2161 311 Gene3D - 22 311 - -
Dod03g2161 311 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 200 309 IPR036291 -
Dod03g2161 311 SUPERFAMILY FAD/NAD(P)-binding domain 33 251 IPR036188 -
Dod03g2161 311 PRINTS FAD-dependent pyridine nucleotide reductase signature 199 217 - -
Dod03g2161 311 PRINTS FAD-dependent pyridine nucleotide reductase signature 138 156 - -
Dod03g2161 311 Pfam Pyridine nucleotide-disulphide oxidoreductase 33 310 IPR023753 GO:0016491
Dod03g2161 311 PANTHER NADH DEHYDROGENASE 22 311 IPR045024 GO:0003954|GO:0006116
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2161 Dod-Chr3 50969996 50972441 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2161 7 311 EF-hand Containing Proteins AT4G05020 64.839 1.12e-136 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2161 K03885 - gmx:100820044 507.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2161 03 50969996 50972441 Dod03g2161 03 50969996 50972441 ECH