Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2148 ATGCTATGCCAGATTCTGAAGCAGAACTTTGGGGTGGAATATCTCAAGAAATGGTTGGGGGGCTACAATATCCTTGAGATGGATGCATGTGCATTGGAATCCCTTTTTACTTCTGTGGTTCCCCTTGCCTCACATGCAGATTTTGAGCCATTTATCCAAAGGATTGCAGATGGGGACACTGGCCCTTTACTCACTCAACAACCCATAACCACTCTTTCCTTAAGTTCTGGAACCACAGAAGGAAGACAGAAGTTCGTACCCTTTACCCGCCACAGTGCACAAACTACCCTTCAAATTTTCACTTTAGCAGCAGCCTATAGATCAAGGGTTTATCCCATAAGGGAAGGAGGAAGGATTCTTGAATTCATATACAGCAGCAAGAGGTTCAAAACAGAAGGAGGCTTAACAGTAGGAACAGCCACAACACACTACTATGCAAGTGAAGAGTTCAAGATCAAACAAGAGAAAACAAAGTCATTCACTTGCAGCCCAGATGAAGTGATCTCTGGTGGAGACTACAAGCAATCCACATACTGCCACCTCCTTCTTGGCCTCTTCTTCTGTGACCAAGTAGAGTTCATCACCTCAGCTTTTGTCTACAGCATGGTTCAAGCCTTCAGAAGCTTTGAGGAGCTTTGGAGAGACATATGCAATGACATTAGATGTGGGACGCTGAGCTCAAGAATCAAATTGCCAAAAATGAGAAGGGCTGTTTTGGACATAATCACTCCAAACCCATGTTTGGCCTCAAAGTTGGAAGCTGTTTGCAAGGATCTAGAATTGTTGGATTGGCTTGGTTTGATCCCAAAGCTTTGGCCAAATGCCAAGTACGTGTATTCCATAATGACAGGGTCTATGCAACCGTACGTGAAGAAACTTAGGCATTATGCAAATGGGTTGCCTTTGGTTAGTGCTGACTATGGCTCAACTGAGAGCTGGATTGGGGTTAATGTGGATCCCAGTTTACCCCCAGAGAAAGTAACATTCACTGTAGTTCCTACTTTCTCTTACTTTGAGTTTATACCACTATATAGACATAAGCAAGATTGCAGTTCAGTTTGTGATGATTTCGTTGAAGAAAAGCCAATTCCACTATCCCAGATTAAAGTTGGACAAGAGTATGAAATAGTCCTCACAACTTTCACAGGACTGTACAGGTGCAGATTAGGGGACGTAGTGGAAGTGGCAGGTTTTCACAACGGGACCCCAAAGTTGAGCTTCGTGTGCAGAAGAAAGCTAATATTGACAGTGAATATAGACAAGAACACAGAGAAGGACCTCCAGCTAGTGGTAGAGAGAGGGTCTCAGCTCCTTAATGAGGCCAAAGCCGAGCTCGTCGATTTCACGAGCTACGCCAACGTCTCAAGCGAACCGGGGCACTACGTGATATATTGGGAGATAAATGGCGAGGTAGACGACAACTTGCTCGACGCGTGTTGCACGGAAATGGACACGTTGTTTGCTGATCATGGCTACGTGGTGTCTAGGAAAACAAACTCAATAGGGCCCCTTGAGCTGTGCATTGTGGAGAGAGGCACTTTCAAGAAGATTTTGGACAACTCGATAGCTAATGGGGCTGCTTTGAGCCAATTCAAGACCCCTAGGTGCACCAATAACCATGTCATCCTCAAAATCCTTAGCACATGCACCGTGAAAAAGTTTCGCAGCACGGCTTATAGCTCAAGTGGTAGTCAACGATGCTATAATGAATAA 1713 0.4483 MLCQILKQNFGVEYLKKWLGGYNILEMDACALESLFTSVVPLASHADFEPFIQRIADGDTGPLLTQQPITTLSLSSGTTEGRQKFVPFTRHSAQTTLQIFTLAAAYRSRVYPIREGGRILEFIYSSKRFKTEGGLTVGTATTHYYASEEFKIKQEKTKSFTCSPDEVISGGDYKQSTYCHLLLGLFFCDQVEFITSAFVYSMVQAFRSFEELWRDICNDIRCGTLSSRIKLPKMRRAVLDIITPNPCLASKLEAVCKDLELLDWLGLIPKLWPNAKYVYSIMTGSMQPYVKKLRHYANGLPLVSADYGSTESWIGVNVDPSLPPEKVTFTVVPTFSYFEFIPLYRHKQDCSSVCDDFVEEKPIPLSQIKVGQEYEIVLTTFTGLYRCRLGDVVEVAGFHNGTPKLSFVCRRKLILTVNIDKNTEKDLQLVVERGSQLLNEAKAELVDFTSYANVSSEPGHYVIYWEINGEVDDNLLDACCTEMDTLFADHGYVVSRKTNSIGPLELCIVERGTFKKILDNSIANGAALSQFKTPRCTNNHVILKILSTCTVKKFRSTAYSSSGSQRCYNE* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2148 570 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 2 559 IPR004993 -
Dod03g2148 570 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.10 2 559 - -
Dod03g2148 570 Pfam GH3 auxin-responsive promoter 2 539 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2148 Dod-Chr3 50717015 50722422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2148 1 557 EF-hand Containing Proteins AT1G23160 35.602 7.00e-114 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2148 K14487 - gmx:100813472 998.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2148 03 50717015 50722422 Dod03g2148 03 50717015 50722422 ECH
Dod10g1288 10 32775189 32779030 Dod03g2148 03 50717015 50722422 PCT