Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2115 ATGGTGGCTGGAAATGGGTTGTTTTATCCCATTTTCGGTTTTGCATCGCTGGTGCTTTTCATTTACATGTCTTTTGGGGACATAAGGATTGGTTTTGATGAAGGACCAGAATTGTCCTTTGTTGGGAGGAATGGTTCACAGTTTGTGGTTGATGACAAAGCTTTCTACATTAATGGTTGGAACTCTTACTGGTTAATGGTGCAATCTGTGGATGATTATTCAAGGCCTAGGGTCCGTGAAATGCTGAGAGCTGGGGCCAAGATGGGCCTCACTGTTTGCAGAACATGGGCGTTCAATGATGGTGACTACAATGCCCTTCAGACTTACCCTGGTGTTTTCAATGAGCAAGCTTTCAAGGCCTTGGACTATGTTATAGCAGAAGCAAGGCAACATGGAATTAGGCTGCTCCTTAGCTTAGTGAATAACTTGCATGCATATGGTGGGAAAACTCAGTATGTCAAATGGGCATGGCAAGAAGGGGTTGGATTAAGCTCGTCTAATGATTCTTTCTTCTATGATCCATCAATCCGTAGTTACTTCAAGAATTACATAAAGACTATTCTGACGAGGAAGAATACTATTACTGGAATTGAATACCGAAATGACCCCATCATTTTTGGTTGGGAATTAATTAATGAACCTCGGTGCATGACTGATCCTTCTGGTGACACCCTCCAAGATTGGATAGAAGAAATGTCAACTTTTGTTAAATTGATCGACAAGAACCATCTGGTGACTGTTGGGCTTGAAGGCTTTTACGGACCTAATGATCCAAAGCGTTTGACTGTCAACCCCGAGGCGTGGGCATCTAGACTTGGATCTGATTTTATTAGGAACTCCAAAATCCCAAATATTGATTTCACCTCTGTTCATATCTATCCTGATCACTGGTTTCGTGAGGAAGTATTTGAAGACTATATGAAATTTGTCTCAAAGTGGATGCTTTCTCACATTGAAGATGGTGACAAGGTATTGAATAAGCCGGTCTTGTTCTCTGAATACGGATTATCAGACCTAATCAAGAACTTTTCGCTGTCTGACCGAGAAAAGATGTATAAAACAATTTTAGACATAACCTACAAATCTGCTAAGAAAAGGAGGTCAGGAGCAGGTGCTTTAGTTTGGCAATTCTTAGTTGGAGGAATGAATGAGTTCCATGATGATTTTGGGATGGTCCCATGGGAGAGGTCATCAACCTATTCACTATTTGTTGAACAATCATGCAGATTAGCCAAAGTCAATGGATGGGCTCCAAAGGAAACAAGTCTCAAACAAATTTGTCAGTAA 1287 0.4103 MVAGNGLFYPIFGFASLVLFIYMSFGDIRIGFDEGPELSFVGRNGSQFVVDDKAFYINGWNSYWLMVQSVDDYSRPRVREMLRAGAKMGLTVCRTWAFNDGDYNALQTYPGVFNEQAFKALDYVIAEARQHGIRLLLSLVNNLHAYGGKTQYVKWAWQEGVGLSSSNDSFFYDPSIRSYFKNYIKTILTRKNTITGIEYRNDPIIFGWELINEPRCMTDPSGDTLQDWIEEMSTFVKLIDKNHLVTVGLEGFYGPNDPKRLTVNPEAWASRLGSDFIRNSKIPNIDFTSVHIYPDHWFREEVFEDYMKFVSKWMLSHIEDGDKVLNKPVLFSEYGLSDLIKNFSLSDREKMYKTILDITYKSAKKRRSGAGALVWQFLVGGMNEFHDDFGMVPWERSSTYSLFVEQSCRLAKVNGWAPKETSLKQICQ* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2115 428 SUPERFAMILY (Trans)glycosidases 39 404 IPR017853 -
Dod03g2115 428 PANTHER GLYCOSIDE HYDROLASE FAMILY 5 PROTEIN 4 427 - -
Dod03g2115 428 Pfam Cellulase (glycosyl hydrolase family 5) 77 376 IPR001547 GO:0004553|GO:0071704
Dod03g2115 428 PANTHER - 4 427 IPR045053 GO:0004553
Dod03g2115 428 Gene3D Glycosidases 37 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2115 Dod-Chr3 50037804 50042914 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2115 3 427 Glycoside Hydrolase AT2G20680 68.706 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2115 K19355 - gmx:100811461 783.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2115 03 50037804 50042914 Dod03g2115 03 50037804 50042914 ECH